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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 5692.8
Min RPKM: 16.2
Std RPKM: 884.0
Median RPKM: 224.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
5692.8
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
4188.5
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
2318.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
2210.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
2198.9
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
2159.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
2105.7
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
2085.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
2072.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
2055.7
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
1911.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
1897.3
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
1753.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
1524.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
1468.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
1443.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
1345.5
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
1196.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
1150.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
1139.8
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
1031.7
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
1023.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
866.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
744.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
734.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
695.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
668.4
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
605.1
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
604.9
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
552.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
546.9
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
542.3
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
533.4
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
531.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
494.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
454.8
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
428.6
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
389.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
368.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
360.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
359.2
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
356.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
338.6
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
332.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
325.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
312.4
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
306.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
279.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
277.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
269.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
233.0
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
226.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
223.2
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
221.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
219.0
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
208.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
199.5
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
187.5
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
181.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
180.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
172.6
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
167.0
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
165.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
157.6
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
153.9
GTEX-144GN-2126-SM-5O99D
50-59 years, male
153.6
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
151.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
142.7
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
133.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
128.7
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
113.3
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
108.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
107.3
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
107.2
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
107.0
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
104.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
101.3
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
97.8
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
97.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
96.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
94.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
94.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
92.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
92.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
89.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
80.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
77.8
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
74.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
67.0
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
62.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
60.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
52.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
50.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
50.2
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
49.6
GTEX-QCQG-0226-SM-48U28
50-59 years, female
47.8
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
46.7
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
38.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
38.4
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
35.9
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
31.9
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
21.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
21.2
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
16.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.