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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 873.1
Min RPKM: 255.7
Std RPKM: 116.2
Median RPKM: 441.3
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
873.1
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
738.7
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
699.4
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
644.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
641.0
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
636.6
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
634.1
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
629.1
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
623.4
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
617.1
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
614.9
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
607.6
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
601.4
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
599.5
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
577.8
GTEX-P78B-1926-SM-3P616
40-49 years, female
574.7
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
572.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
570.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
566.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
566.6
GTEX-Q734-0726-SM-48TZP
40-49 years, female
562.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
555.7
GTEX-RU72-2226-SM-46MUE
50-59 years, female
551.3
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
548.6
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
546.9
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
546.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
541.2
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
538.4
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
529.2
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
527.6
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
526.3
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
525.7
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
524.3
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
511.5
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
496.6
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
493.1
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
493.0
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
489.5
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
489.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
486.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
485.0
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
478.3
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
474.6
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
471.2
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
466.1
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
461.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
460.1
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
444.0
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
441.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
440.4
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
436.6
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
435.0
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
434.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
431.3
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
426.1
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
424.6
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
423.9
GTEX-QCQG-1426-SM-48U22
50-59 years, female
422.1
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
418.9
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
415.3
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
411.7
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
408.1
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
407.0
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
406.4
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
402.6
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
399.2
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
395.6
GTEX-11I78-1926-SM-59878
50-59 years, female
395.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
387.6
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
385.5
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
377.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
374.1
GTEX-S341-0726-SM-4AD5R
40-49 years, female
372.1
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
364.8
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
363.5
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
362.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
362.3
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
362.2
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
360.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
356.1
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
355.4
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
350.8
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
350.0
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
345.6
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
340.5
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
336.7
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
332.3
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
327.9
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
314.8
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
294.6
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
290.9
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
285.8
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
285.3
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
280.6
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
264.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
258.5
GTEX-S32W-1226-SM-4AD67
50-59 years, female
255.7
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.