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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 953.3
Min RPKM: 169.6
Std RPKM: 175.4
Median RPKM: 473.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
953.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
929.9
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
845.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
787.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
785.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
774.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
768.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
744.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
732.1
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
725.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
724.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
717.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
694.4
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
690.5
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
665.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
664.3
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
656.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
652.3
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
649.3
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
646.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
620.6
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
615.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
606.2
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
603.3
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
601.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
599.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
594.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
580.6
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
579.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
560.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
544.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
530.5
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
522.5
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
520.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
519.7
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
518.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
515.2
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
512.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
506.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
496.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
493.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
493.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
488.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
487.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
480.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
478.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
477.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
469.0
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
466.8
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
462.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
461.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
456.1
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
454.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
451.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
443.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
437.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
427.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
424.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
420.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
413.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
399.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
384.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
380.3
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
375.7
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
368.1
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
363.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
361.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
360.0
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
355.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
352.2
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
348.8
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
347.1
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
342.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
326.9
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
314.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
300.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
296.6
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
294.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
294.1
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
290.8
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
288.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
284.8
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
276.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
270.3
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
259.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
258.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
251.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
244.4
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
231.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
229.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
214.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
199.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
192.3
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
169.6
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.