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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 738.3
Min RPKM: 145.8
Std RPKM: 113.8
Median RPKM: 347.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
738.3
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
666.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
615.1
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
607.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
602.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
587.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
539.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
536.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
522.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
513.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
509.0
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
505.2
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
495.4
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
495.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
474.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
470.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
469.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
465.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
461.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
457.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
454.4
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
447.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
444.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
441.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
439.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
439.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
438.3
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
437.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
426.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
421.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
414.6
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
413.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
408.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
405.6
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
404.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
403.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
402.0
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
401.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
397.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
394.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
393.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
388.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
385.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
380.9
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
380.8
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
379.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
378.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
373.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
369.9
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
367.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
365.0
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
364.5
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
361.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
360.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
357.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
353.8
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
350.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
349.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
347.4
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
344.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
341.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
340.4
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
337.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
336.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
332.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
330.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
329.5
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
328.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
326.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
323.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
323.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
318.6
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
318.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
313.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
312.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
311.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
304.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
304.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
304.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
302.1
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
301.9
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
301.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
300.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
297.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
296.0
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
295.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
289.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
285.3
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
279.6
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
277.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
268.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
265.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
262.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
260.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
253.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
245.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
237.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
232.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
231.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
231.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
229.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
229.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
220.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
218.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
218.5
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
214.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
213.7
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
204.2
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
193.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
182.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
179.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
172.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
168.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
167.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
165.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
149.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
145.8
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.