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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 43.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 5.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2648.6
Min RPKM: 0.9
Std RPKM: 239.2
Median RPKM: 34.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
2648.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
1097.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
827.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
813.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
775.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
674.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
575.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
575.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
506.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
491.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
466.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
455.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
395.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
395.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
384.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
383.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
361.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
357.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
340.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
330.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
305.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
296.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
287.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
278.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
263.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
261.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
248.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
240.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
235.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
209.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
208.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
207.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
204.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
191.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
187.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
184.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
171.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
164.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
156.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
154.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
136.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
128.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
125.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
120.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
116.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
115.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
111.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
108.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
100.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
100.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
99.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
96.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
92.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
92.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
89.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
89.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
88.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
87.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
87.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
86.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
78.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
71.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
70.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
69.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
69.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
65.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
65.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
63.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
63.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
62.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
62.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
61.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
60.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
58.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
56.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
55.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
54.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
53.7
GTEX-11OF3-1926-SM-59889
60-69 years, male
51.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
50.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
50.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
50.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
49.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
45.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
44.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
44.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
44.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
43.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
43.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
43.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
42.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
42.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
41.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
41.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
41.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
40.8
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
40.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
38.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
38.7
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
38.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
38.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
37.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
37.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
36.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
35.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
34.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
34.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
34.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
34.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
32.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
30.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
30.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
29.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
27.6
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
26.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
26.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
25.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
25.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
23.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
22.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
22.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
22.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
20.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
20.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
19.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
17.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
17.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
17.1
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
16.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
16.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
16.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
15.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
15.4
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
14.8
GTEX-TML8-1226-SM-32QON
40-49 years, female
14.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
14.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
14.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
13.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
13.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
13.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
13.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
13.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
12.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
12.5
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
12.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
12.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
12.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
12.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
11.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
11.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
11.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
11.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
10.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
10.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
10.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
10.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
9.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
9.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
8.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
8.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
8.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
8.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
8.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
8.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
8.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
7.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
7.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
6.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
6.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
6.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
6.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
6.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
6.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
6.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
6.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
5.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
5.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
5.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
5.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
5.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
4.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
4.8
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
4.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
4.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
4.6
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
4.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
4.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
4.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
4.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
3.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
3.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
3.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
3.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
3.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
2.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
2.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
2.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
2.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
2.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
2.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
2.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
2.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
2.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
2.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
2.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
2.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
1.8
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
1.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
1.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
1.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
1.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
1.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
1.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
0.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.