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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 13.6
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 102.9
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 26
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 145.6
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 47
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 189.8
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 476.1
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 177.9
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 740.9
Min RPKM: 0.1
Std RPKM: 156.6
Median RPKM: 116.8
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
740.9
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
677.4
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
573.2
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
549.7
GTEX-RU72-1426-SM-46MUF
50-59 years, female
536.4
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
508.3
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
479.9
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
422.3
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
417.3
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
415.5
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
410.8
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
395.3
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
393.8
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
387.0
GTEX-R53T-0326-SM-48FEC
50-59 years, female
386.1
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
368.2
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
340.9
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
331.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
320.1
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
307.0
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
305.4
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
280.1
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
276.8
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
275.1
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
272.4
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
266.1
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
248.6
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
241.9
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
241.1
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
236.3
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
235.0
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
232.6
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
231.3
GTEX-S33H-1626-SM-4AD68
30-39 years, male
221.0
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
219.1
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
214.0
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
212.4
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
210.6
GTEX-13113-1326-SM-5GCOI
60-69 years, female
171.9
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
168.0
GTEX-YECK-1926-SM-4W21H
60-69 years, male
168.0
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
167.8
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
165.5
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
164.4
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
163.5
GTEX-RN64-1826-SM-48FDV
50-59 years, male
158.3
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
148.5
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
147.4
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
141.9
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
139.0
GTEX-1399T-0826-SM-5IFES
60-69 years, male
137.5
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
136.5
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
135.1
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
131.1
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
128.6
GTEX-QESD-2026-SM-447BI
20-29 years, male
128.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
125.9
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
122.7
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
121.2
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
116.8
GTEX-11ZUS-2526-SM-59872
30-39 years, male
115.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
115.0
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
111.4
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
109.0
GTEX-12696-0826-SM-5EGGE
60-69 years, male
103.4
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
100.2
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
98.0
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
96.1
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
94.4
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
90.8
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
85.4
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
84.7
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
84.6
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
82.6
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
72.4
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
72.3
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
69.2
GTEX-Q734-0326-SM-48U15
40-49 years, female
69.0
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
67.3
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
67.2
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
65.2
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
61.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
61.4
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
61.0
GTEX-13112-1426-SM-5EGH8
50-59 years, male
50.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
49.3
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
48.0
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
44.9
GTEX-P78B-1326-SM-3P611
40-49 years, female
42.6
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
40.5
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
39.2
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
39.1
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
31.0
GTEX-REY6-1226-SM-48FDR
60-69 years, male
30.3
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
29.2
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
26.3
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
21.5
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
19.4
GTEX-S32W-1926-SM-4AD63
50-59 years, female
18.5
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
17.5
GTEX-X261-1726-SM-4PQYT
50-59 years, male
16.7
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
16.6
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
16.4
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
14.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
11.8
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
9.9
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
8.3
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
8.1
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
6.7
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
6.2
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
5.3
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
4.3
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
2.7
GTEX-11GSP-0626-SM-5986T
60-69 years, female
1.5
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
1.4
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
0.6
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
0.3
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
0.1
GTEX-QEL4-1226-SM-447A4
50-59 years, male
0.1
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
