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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 63.7
Min RPKM: 23.3
Std RPKM: 7.3
Median RPKM: 36.5
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
63.7
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
53.5
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
51.4
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
50.4
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
50.1
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
49.9
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
48.4
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
47.8
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
46.4
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
46.4
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
45.3
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
44.8
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
43.8
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
43.5
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
43.2
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
43.2
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
42.6
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
42.3
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
42.1
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
42.0
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
41.7
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
41.3
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
40.9
GTEX-13O61-1326-SM-5KM31
60-69 years, male
40.9
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
40.7
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
40.7
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
40.4
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
39.6
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
39.2
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
38.9
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
38.7
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
38.6
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
38.2
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
38.1
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
38.0
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
38.0
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
37.7
GTEX-ZTSS-0926-SM-59865
40-49 years, male
37.7
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
37.4
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
37.2
GTEX-13111-1426-SM-5DUW3
50-59 years, male
36.8
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
36.7
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
36.6
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
36.6
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
36.5
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
36.2
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
36.1
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
35.9
GTEX-117YX-0326-SM-5GICL
50-59 years, male
35.7
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
35.4
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
35.3
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
34.3
GTEX-1122O-1326-SM-5H11F
60-69 years, female
34.1
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
34.1
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
34.0
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
33.8
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
33.7
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
33.5
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
33.2
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
32.5
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
32.5
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
32.3
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
32.2
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
32.1
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
32.1
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
32.0
GTEX-1192X-2526-SM-59868
50-59 years, male
31.6
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
31.6
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
31.3
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
31.3
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
30.9
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
30.9
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
30.3
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
30.1
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
29.9
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
29.2
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
28.8
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
28.2
GTEX-13113-1226-SM-5EGHT
60-69 years, female
28.0
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
27.6
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
26.9
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
26.7
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
25.7
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
25.5
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
25.4
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
24.2
GTEX-111YS-1426-SM-5GID8
60-69 years, male
23.3
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
23.3
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.