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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 10.3
Min RPKM: 0.7
Std RPKM: 1.8
Median RPKM: 2.6
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
10.3
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
9.6
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
7.2
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
6.6
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
6.5
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
6.3
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
6.2
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
6.1
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
6.1
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
5.9
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
5.9
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
5.8
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
5.6
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
5.5
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
5.4
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
5.4
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
5.3
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
5.3
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
4.6
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
4.3
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
4.2
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
4.1
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
4.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
4.1
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
4.0
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
3.9
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
3.9
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
3.9
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
3.8
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
3.7
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
3.6
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
3.5
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
3.3
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
3.3
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
3.3
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
3.2
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
3.1
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
3.1
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
2.9
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
2.9
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
2.9
GTEX-QCQG-1226-SM-48U23
50-59 years, female
2.9
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
2.8
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
2.7
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
2.7
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
2.7
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
2.6
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
2.6
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
2.6
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
2.5
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
2.4
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
2.4
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
2.4
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
2.4
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
2.3
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
2.3
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
2.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
2.3
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
2.2
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
2.2
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
2.1
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
2.1
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
2.1
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
2.0
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
2.0
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
1.8
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
1.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
1.8
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
1.8
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
1.8
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
1.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
1.7
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
1.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
1.7
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
1.7
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
1.6
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
1.6
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
1.6
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
1.4
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
1.4
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
1.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
1.3
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
1.3
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
1.3
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
1.3
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
1.3
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
1.3
GTEX-11I78-2026-SM-5987C
50-59 years, female
1.2
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
1.2
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
1.2
GTEX-S341-1226-SM-4AD5S
40-49 years, female
1.1
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
1.0
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
1.0
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
0.9
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
0.8
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
0.7
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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