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SYCE1L
COLON - Expression summary
RNA expressioni
HPA:1.2TPM
GTEx:1.2RPKM
FANTOM5:5.9Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 1.2
overview Male, age 54 Sample 1
TPM: 1.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 1.2
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 1.1
Samples: 149

Max RPKM: 4.2
Min RPKM: 0.2
Std RPKM: 0.6
Median RPKM: 1.0
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 4.2
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 3.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 2.9
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 2.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 2.9
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 2.6
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 2.5
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 2.3
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 2.3
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 2.3
Show all
Colon - Transverse
RPKM: 1.3
Samples: 196

Max RPKM: 3.8
Min RPKM: 0.1
Std RPKM: 0.5
Median RPKM: 1.2
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 3.8
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 3.1
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 2.9
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 2.7
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 2.7
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 2.6
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 2.5
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 2.5
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 2.4
GTEX-PX3G-1426-SM-48U1J 20-29 years, female 2.4
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 5.9
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 6.0
FF:10014-101C5 62,83,84 years, mixed 5.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.