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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1089.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1182.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2420.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 434.3
Min RPKM: 114.2
Std RPKM: 56.8
Median RPKM: 212.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
434.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
415.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
404.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
347.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
340.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
339.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
338.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
333.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
332.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
331.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
330.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
329.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
329.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
328.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
326.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
323.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
322.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
321.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
314.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
307.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
303.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
303.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
295.7
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
295.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
285.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
285.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
281.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
275.0
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
274.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
273.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
273.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
273.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
270.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
268.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
268.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
266.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
266.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
266.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
261.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
260.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
260.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
259.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
257.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
257.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
255.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
255.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
248.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
248.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
248.2
GTEX-11P81-1926-SM-5BC53
30-39 years, female
248.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
247.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
247.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
245.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
245.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
244.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
243.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
241.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
241.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
240.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
239.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
239.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
239.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
238.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
238.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
235.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
235.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
234.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
234.2
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
233.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
233.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
233.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
233.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
232.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
229.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
228.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
228.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
227.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
227.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
226.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
224.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
223.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
223.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
223.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
223.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
221.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
221.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
221.1
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
220.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
220.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
218.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
218.6
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
218.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
218.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
218.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
218.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
216.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
216.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
215.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
215.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
214.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
214.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
214.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
213.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
213.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
213.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
213.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
212.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
211.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
211.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
210.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
209.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
208.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
207.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
207.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
206.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
206.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
204.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
203.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
201.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
201.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
200.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
200.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
200.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
200.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
199.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
198.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
198.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
197.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
193.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
192.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
191.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
190.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
189.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
189.9
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
189.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
188.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
188.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
188.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
188.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
185.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
185.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
184.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
184.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
183.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
183.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
183.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
182.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
181.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
180.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
180.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
179.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
179.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
179.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
178.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
177.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
175.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
175.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
174.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
174.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
173.8
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
173.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
173.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
172.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
172.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
172.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
171.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
171.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
170.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
170.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
170.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
169.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
169.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
169.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
168.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
168.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
167.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
166.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
166.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
165.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
165.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
163.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
163.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
160.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
160.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
158.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
158.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
158.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
158.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
158.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
157.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
157.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
157.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
156.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
153.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
153.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
152.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
152.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
151.9
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
151.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
150.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
149.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
149.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
148.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
147.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
147.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
142.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
134.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
134.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
131.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
128.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
127.5
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
124.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
123.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
114.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.