We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 501.8
Min RPKM: 129.9
Std RPKM: 78.2
Median RPKM: 270.7
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
501.8
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
449.1
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
438.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
436.2
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
430.9
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
430.4
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
429.3
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
408.9
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
404.3
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
395.1
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
384.5
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
381.4
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
379.8
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
372.8
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
370.2
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
370.2
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
366.2
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
362.7
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
360.4
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
358.5
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
352.5
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
351.9
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
343.8
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
339.1
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
338.1
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
329.8
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
328.0
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
325.4
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
324.2
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
323.6
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
311.9
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
305.5
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
304.9
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
303.3
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
299.5
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
299.3
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
295.6
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
295.2
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
294.2
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
293.8
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
291.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
290.3
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
288.5
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
280.0
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
277.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
277.4
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
273.9
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
271.1
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
270.2
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
269.2
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
266.9
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
264.7
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
260.8
GTEX-QCQG-1226-SM-48U23
50-59 years, female
258.7
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
257.0
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
254.6
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
250.1
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
246.9
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
245.0
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
244.4
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
243.4
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
241.3
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
239.4
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
236.8
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
235.7
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
233.6
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
232.9
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
230.9
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
224.6
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
223.1
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
221.9
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
221.8
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
221.5
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
220.6
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
218.0
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
217.4
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
216.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
213.9
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
213.1
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
209.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
208.3
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
204.5
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
201.8
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
201.0
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
193.4
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
193.3
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
189.2
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
188.0
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
187.0
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
181.5
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
181.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
180.4
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
169.9
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
159.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
146.6
GTEX-S341-1226-SM-4AD5S
40-49 years, female
129.9
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.