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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 297.6
Min RPKM: 94.5
Std RPKM: 46.8
Median RPKM: 143.7
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
297.6
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
289.3
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
282.4
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
282.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
266.6
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
251.6
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
245.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
245.1
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
241.7
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
236.9
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
234.0
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
227.1
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
220.5
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
210.8
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
198.5
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
198.5
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
195.6
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
193.2
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
186.2
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
185.8
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
185.5
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
184.9
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
183.7
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
181.7
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
173.3
GTEX-Q734-0726-SM-48TZP
40-49 years, female
173.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
172.6
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
171.6
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
171.4
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
170.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
169.1
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
166.9
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
164.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
164.1
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
162.4
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
159.7
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
158.5
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
157.4
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
156.4
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
155.5
GTEX-S32W-1226-SM-4AD67
50-59 years, female
154.5
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
152.4
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
152.2
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
152.1
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
150.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
150.1
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
147.1
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
144.8
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
143.7
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
142.9
GTEX-RU72-2226-SM-46MUE
50-59 years, female
141.6
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
140.9
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
139.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
139.7
GTEX-QCQG-1426-SM-48U22
50-59 years, female
139.5
GTEX-11I78-1926-SM-59878
50-59 years, female
139.3
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
138.7
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
138.3
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
138.3
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
137.1
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
136.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
136.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
136.2
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
135.7
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
135.3
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
133.9
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
133.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
132.5
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
132.0
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
131.6
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
125.7
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
125.3
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
124.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
124.5
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
124.4
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
123.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
121.1
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
121.0
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
119.1
GTEX-P78B-1926-SM-3P616
40-49 years, female
118.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
116.7
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
116.6
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
116.3
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
114.5
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
113.6
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
112.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
112.1
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
111.0
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
110.7
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
105.9
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
102.7
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
102.6
GTEX-S341-0726-SM-4AD5R
40-49 years, female
102.2
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
97.2
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
96.2
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
95.5
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
94.5
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.