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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 0.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 0
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 991.4
Min RPKM: 181.4
Std RPKM: 137.5
Median RPKM: 395.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
991.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
962.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
917.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
909.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
800.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
763.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
760.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
742.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
735.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
717.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
710.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
710.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
687.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
686.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
683.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
659.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
654.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
650.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
648.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
640.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
635.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
617.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
611.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
610.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
607.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
602.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
595.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
589.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
579.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
577.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
564.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
556.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
553.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
550.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
549.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
546.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
527.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
515.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
513.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
512.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
508.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
504.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
500.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
499.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
496.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
493.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
492.6
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
491.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
490.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
486.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
485.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
484.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
481.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
479.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
477.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
475.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
469.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
469.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
468.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
465.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
464.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
463.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
462.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
460.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
459.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
456.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
451.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
450.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
449.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
447.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
446.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
445.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
445.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
443.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
443.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
443.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
440.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
437.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
432.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
432.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
430.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
429.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
425.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
423.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
420.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
420.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
420.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
420.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
418.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
416.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
414.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
412.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
412.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
408.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
407.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
406.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
406.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
404.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
403.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
402.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
402.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
400.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
400.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
399.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
398.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
398.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
396.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
394.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
394.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
393.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
391.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
389.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
388.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
388.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
388.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
388.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
382.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
381.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
379.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
379.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
378.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
377.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
377.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
376.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
375.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
375.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
374.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
373.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
373.0
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
372.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
371.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
370.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
370.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
370.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
370.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
369.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
369.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
364.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
363.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
362.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
360.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
359.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
357.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
356.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
356.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
354.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
354.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
352.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
352.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
351.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
350.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
350.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
348.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
347.9
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
347.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
347.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
346.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
342.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
341.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
341.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
340.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
338.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
337.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
337.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
336.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
334.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
334.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
334.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
328.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
327.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
326.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
326.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
325.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
325.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
324.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
324.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
323.8
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
322.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
322.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
321.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
319.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
318.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
317.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
312.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
309.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
307.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
306.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
304.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
304.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
301.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
300.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
298.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
297.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
296.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
289.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
287.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
286.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
283.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
277.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
276.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
273.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
271.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
269.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
268.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
266.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
266.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
255.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
254.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
238.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
237.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
236.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
220.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
208.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
181.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.