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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 583.8
Min RPKM: 61.0
Std RPKM: 114.1
Median RPKM: 203.2
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
583.8
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
557.4
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
507.9
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
442.2
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
437.9
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
423.1
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
421.3
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
405.7
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
404.4
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
368.1
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
357.9
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
355.4
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
343.1
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
339.8
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
338.9
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
338.6
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
313.7
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
312.0
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
311.4
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
303.6
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
302.0
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
290.7
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
290.1
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
285.1
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
285.0
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
282.8
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
282.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
281.0
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
279.2
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
268.5
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
262.7
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
258.5
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
257.7
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
241.9
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
236.9
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
235.9
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
234.3
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
229.3
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
225.8
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
224.8
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
222.7
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
218.2
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
213.6
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
212.0
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
210.2
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
207.0
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
204.1
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
204.0
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
202.4
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
200.5
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
199.6
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
192.4
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
186.1
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
185.7
GTEX-QCQG-1226-SM-48U23
50-59 years, female
181.9
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
177.2
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
171.6
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
167.8
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
163.0
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
159.4
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
153.7
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
152.4
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
150.6
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
149.2
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
148.5
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
143.4
GTEX-S341-1226-SM-4AD5S
40-49 years, female
141.8
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
139.9
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
139.4
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
136.9
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
132.3
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
125.5
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
123.4
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
122.9
GTEX-11I78-2026-SM-5987C
50-59 years, female
122.4
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
120.1
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
116.9
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
116.4
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
114.9
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
109.1
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
108.9
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
106.4
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
103.8
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
101.0
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
99.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
94.7
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
88.5
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
85.0
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
76.6
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
76.6
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
75.3
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
69.9
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
67.4
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
67.2
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
61.7
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
61.0
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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