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HLA-C
COLON - Expression summary
RNA expressioni
HPA:151.0TPM
GTEx:244.6RPKM
FANTOM5:288.9Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 151.0
overview Male, age 54 Sample 1
TPM: 1.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 425.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 12.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 431.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 196.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 487
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 402.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 244.6
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 156.4
Samples: 149

Max RPKM: 482.0
Min RPKM: 40.0
Std RPKM: 99.2
Median RPKM: 142.1
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 482.0
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 458.8
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 430.2
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 418.4
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 398.9
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 383.7
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 373.9
GTEX-1122O-1426-SM-5H11R 60-69 years, female 366.1
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 360.5
GTEX-12696-1926-SM-5EGJT 60-69 years, male 354.7
Show all
Colon - Transverse
RPKM: 311.6
Samples: 196

Max RPKM: 1577.4
Min RPKM: 51.9
Std RPKM: 196.0
Median RPKM: 275.6
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 1577.4
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 865.9
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 829.8
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 804.4
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 739.7
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 724.7
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 721.5
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 712.3
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 695.6
GTEX-WFON-1426-SM-4LVMT 40-49 years, male 654.0
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 288.9
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 182.1
FF:10014-101C5 62,83,84 years, mixed 288.9

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.