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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 391.8
Min RPKM: 48.2
Std RPKM: 66.7
Median RPKM: 193.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
391.8
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
377.1
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
360.2
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
348.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
338.1
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
318.1
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
316.8
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
306.2
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
301.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
299.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
291.5
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
289.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
272.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
269.9
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
269.4
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
268.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
265.2
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
260.3
GTEX-QLQW-0126-SM-447BK
30-39 years, male
257.8
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
257.4
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
255.5
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
254.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
249.7
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
241.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
240.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
237.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
235.7
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
234.7
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
232.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
229.0
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
228.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
228.8
GTEX-Q734-0226-SM-48U1A
40-49 years, female
225.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
222.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
221.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
221.4
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
220.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
219.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
217.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
216.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
213.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
212.0
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
210.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
209.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
209.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
203.8
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
202.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
201.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
199.5
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
199.1
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
197.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
195.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
191.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
190.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
187.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
186.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
183.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
183.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
181.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
180.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
179.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
179.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
178.5
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
177.3
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
176.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
174.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
173.3
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
171.8
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
171.5
GTEX-144GN-2126-SM-5O99D
50-59 years, male
169.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
169.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
167.4
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
164.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
161.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
160.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
160.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
159.5
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
155.3
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
155.2
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
153.6
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
149.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
149.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
145.8
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
144.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
143.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
142.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
138.1
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
136.6
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
135.0
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
128.1
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
125.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
124.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
121.9
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
120.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
116.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
113.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
113.1
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
106.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
105.9
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
97.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
89.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
88.6
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
79.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
48.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.