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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 74.2
Min RPKM: 17.6
Std RPKM: 10.6
Median RPKM: 41.4
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
74.2
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
61.4
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
60.1
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
56.3
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
54.5
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
53.8
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
53.2
GTEX-13113-1526-SM-5EGHV
60-69 years, female
52.8
GTEX-13O21-1926-SM-5MR39
50-59 years, male
52.4
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
52.0
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
51.3
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
50.8
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
50.5
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
50.0
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
49.6
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
48.7
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
47.4
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
46.7
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
46.3
GTEX-11P82-0926-SM-5986X
20-29 years, male
44.3
GTEX-Y111-2626-SM-4TT24
50-59 years, male
43.5
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
43.0
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
43.0
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
42.6
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
42.4
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
42.3
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
41.9
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
41.5
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
41.4
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
41.3
GTEX-1445S-2926-SM-5O993
60-69 years, male
41.2
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
41.1
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
40.1
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
39.9
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
39.8
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
39.5
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
38.9
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
38.1
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
35.1
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
34.7
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
34.6
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
34.3
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
34.2
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
32.9
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
32.6
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
32.1
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
32.0
GTEX-X261-2426-SM-4PQZU
50-59 years, male
30.5
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
30.1
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
29.6
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
29.0
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
28.6
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
27.9
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
26.0
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
23.9
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
21.9
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
17.6
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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