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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 0.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 93.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 0
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 713.1
Min RPKM: 38.5
Std RPKM: 115.6
Median RPKM: 203.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
713.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
570.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
566.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
562.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
558.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
536.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
527.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
516.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
492.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
453.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
442.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
428.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
424.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
420.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
413.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
410.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
410.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
409.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
407.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
407.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
405.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
403.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
396.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
395.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
388.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
382.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
381.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
373.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
370.0
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
365.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
354.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
343.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
332.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
331.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
331.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
331.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
327.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
326.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
320.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
318.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
316.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
314.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
312.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
301.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
301.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
298.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
296.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
290.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
288.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
288.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
284.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
283.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
282.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
280.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
276.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
275.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
273.3
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
272.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
270.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
267.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
264.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
264.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
263.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
260.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
259.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
258.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
255.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
253.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
251.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
251.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
250.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
248.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
245.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
244.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
243.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
243.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
242.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
242.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
239.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
238.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
236.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
232.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
232.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
230.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
229.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
227.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
225.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
223.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
222.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
221.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
220.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
220.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
217.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
216.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
215.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
215.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
215.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
214.8
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
212.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
211.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
208.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
207.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
206.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
206.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
205.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
205.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
204.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
203.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
200.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
200.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
198.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
198.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
194.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
193.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
188.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
187.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
186.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
186.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
184.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
184.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
183.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
182.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
180.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
177.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
176.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
176.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
176.5
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
174.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
173.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
173.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
172.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
170.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
170.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
170.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
167.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
167.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
167.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
166.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
166.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
166.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
165.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
165.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
165.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
164.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
161.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
160.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
157.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
156.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
155.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
154.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
154.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
153.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
153.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
152.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
150.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
150.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
150.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
150.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
149.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
148.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
145.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
145.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
144.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
144.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
142.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
141.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
140.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
140.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
139.8
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
139.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
139.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
136.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
136.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
136.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
132.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
131.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
131.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
130.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
130.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
128.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
127.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
126.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
125.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
122.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
122.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
121.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
119.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
113.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
112.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
112.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
110.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
110.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
109.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
108.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
108.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
101.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
99.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
99.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
98.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
93.9
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
91.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
87.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
87.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
86.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
85.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
83.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
80.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
74.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
63.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
58.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
57.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
46.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
39.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
38.5
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.