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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 238.6
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 178.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 92.6
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 404.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 307.8
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 229.9
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 201.3
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 295
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 382.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 501.2
Min RPKM: 63.6
Std RPKM: 83.9
Median RPKM: 277.0
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
501.2
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
475.1
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
468.7
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
448.7
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
426.8
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
422.9
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
416.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
411.1
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
406.1
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
400.1
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
397.4
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
394.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
389.5
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
387.0
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
383.4
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
382.6
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
379.7
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
374.8
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
365.5
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
364.6
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
360.0
GTEX-Y111-2426-SM-4TT23
50-59 years, male
356.3
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
355.2
GTEX-S95S-1126-SM-4B64E
60-69 years, male
354.5
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
354.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
351.4
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
347.1
GTEX-13112-0226-SM-5P9IV
50-59 years, male
343.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
341.7
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
341.4
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
340.8
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
339.5
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
338.9
GTEX-REY6-0126-SM-48FDT
60-69 years, male
338.9
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
335.8
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
334.0
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
332.0
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
331.1
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
330.8
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
330.2
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
326.4
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
324.0
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
323.6
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
322.0
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
320.4
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
319.3
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
318.3
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
316.9
GTEX-11OF3-1826-SM-5987N
60-69 years, male
315.5
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
314.5
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
313.8
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
312.5
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
310.5
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
310.4
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
309.5
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
308.6
GTEX-12696-0226-SM-5EGL3
60-69 years, male
308.0
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
305.5
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
302.5
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
301.9
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
301.7
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
299.5
GTEX-R55D-0126-SM-48FEL
50-59 years, male
298.8
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
298.2
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
297.9
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
296.2
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
294.3
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
294.2
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
294.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
292.9
GTEX-13111-1526-SM-5EGJX
50-59 years, male
290.1
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
289.5
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
288.5
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
287.9
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
285.3
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
284.2
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
283.0
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
282.2
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
282.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
281.1
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
280.9
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
280.0
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
279.8
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
279.0
GTEX-V955-1926-SM-4KL1L
60-69 years, male
278.0
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
277.8
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
276.1
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
272.3
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
271.1
GTEX-QLQW-1026-SM-447A9
30-39 years, male
267.3
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
266.8
GTEX-117XS-2026-SM-5GID1
60-69 years, male
264.8
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
264.0
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
260.8
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
258.4
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
257.0
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
254.9
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
254.2
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
253.6
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
252.8
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
249.5
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
249.2
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
245.5
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
244.9
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
244.8
GTEX-XPT6-1626-SM-4B655
20-29 years, male
242.9
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
240.8
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
239.6
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
238.3
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
237.0
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
235.3
GTEX-R55C-1426-SM-48FED
40-49 years, male
235.0
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
233.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
232.5
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
231.4
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
228.2
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
228.2
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
227.7
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
227.3
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
226.6
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
225.1
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
223.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
221.7
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
216.3
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
213.6
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
208.6
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
208.3
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
205.8
GTEX-X261-2326-SM-4PQYU
50-59 years, male
205.0
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
203.4
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
203.0
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
202.6
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
201.0
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
200.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
199.7
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
198.9
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
198.7
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
197.4
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
197.2
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
188.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
184.4
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
182.1
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
181.4
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
181.2
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
180.5
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
180.0
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
179.6
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
175.0
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
171.6
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
170.2
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
169.2
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
167.6
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
162.7
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
153.7
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
149.2
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
148.2
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
145.9
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
143.7
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
141.7
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
140.0
GTEX-RN64-2326-SM-48FDW
50-59 years, male
139.1
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
136.3
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
131.5
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
129.7
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
128.0
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
126.7
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
122.5
GTEX-S33H-0126-SM-4AD62
30-39 years, male
107.1
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
105.0
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
90.3
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
67.4
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
63.6
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.