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SOX18
COLON - Expression summary
RNA expressioni
HPA:4.1TPM
GTEx:11.0RPKM
FANTOM5:36.3Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 4.1
overview Male, age 54 Sample 1
TPM: 7.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 32.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 11.0
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 10.7
Samples: 149

Max RPKM: 45.3
Min RPKM: 1.6
Std RPKM: 7.3
Median RPKM: 8.9
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 45.3
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 45.0
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 42.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 30.7
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 28.4
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 26.0
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 25.6
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 24.3
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 23.8
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 23.5
Show all
Colon - Transverse
RPKM: 11.3
Samples: 196

Max RPKM: 117.9
Min RPKM: 1.4
Std RPKM: 12.6
Median RPKM: 8.1
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 117.9
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 90.5
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 57.9
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 56.6
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 46.8
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 42.6
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 33.7
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 32.1
GTEX-ZZ64-0726-SM-5GZX4 20-29 years, male 26.8
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 26.7
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 36.3
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 42.8
FF:10014-101C5 62,83,84 years, mixed 36.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.