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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 236.8
Min RPKM: 36.1
Std RPKM: 47.5
Median RPKM: 122.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
236.8
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
232.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
212.5
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
208.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
207.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
206.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
201.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
199.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
198.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
196.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
192.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
190.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
187.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
181.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
176.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
175.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
169.6
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
166.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
162.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
162.1
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
161.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
160.5
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
160.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
160.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
159.9
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
154.0
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
149.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
147.9
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
146.2
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
145.8
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
144.9
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
139.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
139.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
138.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
137.5
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
137.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
137.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
137.1
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
134.3
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
134.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
133.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
130.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
129.8
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
129.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
128.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
123.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
123.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
121.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
121.6
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
121.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
120.3
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
116.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
114.5
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
113.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
113.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
112.9
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
109.5
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
108.7
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
106.0
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
105.3
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
103.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
100.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
98.6
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
98.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
94.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
92.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
90.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
89.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
88.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
88.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
88.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
87.7
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
87.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
86.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
85.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
82.5
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
81.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
79.4
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
76.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
68.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
67.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
65.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
64.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
62.6
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
61.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
60.9
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
58.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
56.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
54.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
51.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
45.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
41.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
40.4
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
36.1
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.