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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 639.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 274.1
Min RPKM: 95.6
Std RPKM: 40.1
Median RPKM: 201.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
274.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
265.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
263.6
GTEX-X585-3026-SM-46MWF
50-59 years, male
258.3
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
257.0
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
255.8
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
252.3
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
251.2
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
250.7
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
249.3
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
247.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
244.6
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
243.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
243.2
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
236.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
235.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
234.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
233.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
233.0
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
231.2
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
229.9
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
228.1
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
225.5
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
224.9
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
224.5
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
224.2
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
223.0
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
222.9
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
222.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
221.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
221.2
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
220.5
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
219.7
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
219.5
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
218.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
218.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
217.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
217.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
217.4
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
217.2
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
216.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
213.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
213.0
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
212.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
212.9
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
211.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
210.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
209.7
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
209.4
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
207.8
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
206.1
GTEX-11PRG-2926-SM-5987A
50-59 years, male
205.8
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
204.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
204.4
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
202.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
202.4
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
201.2
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
201.0
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
200.1
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
199.1
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
199.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
198.8
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
197.9
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
194.6
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
193.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
190.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
190.7
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
189.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
189.3
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
187.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
183.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
183.4
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
182.0
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
181.1
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
180.2
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
179.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
176.9
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
176.3
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
174.1
GTEX-144FL-3026-SM-5O99C
50-59 years, male
171.1
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
171.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
170.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
170.1
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
169.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
169.0
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
168.8
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
168.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
164.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
161.8
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
161.8
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
159.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
158.1
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
156.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
155.0
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
154.8
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
152.3
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
151.4
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
151.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
147.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
144.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
140.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
138.0
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
136.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
131.2
GTEX-11GSP-3226-SM-5986O
60-69 years, female
130.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
129.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
129.4
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
114.9
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
114.7
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
111.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
110.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
109.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
108.9
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
95.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 193.5
Samples: 108
Max RPKM: 305.7
Min RPKM: 81.0
Std RPKM: 55.9
Median RPKM: 211.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
305.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
302.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
294.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
291.3
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
289.1
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
288.1
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
283.0
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
275.2
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
267.1
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
263.5
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
261.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
256.2
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
255.5
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
253.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
249.8
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
245.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
244.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
243.3
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
242.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
242.1
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
238.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
238.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
235.3
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
234.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
233.8
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
233.6
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
233.2
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
231.3
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
231.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
230.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
229.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
228.6
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
227.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
226.5
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
225.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
223.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
221.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
220.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
219.4
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
219.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
218.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
218.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
218.0
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
217.4
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
214.2
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
213.8
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
213.6
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
213.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
213.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
213.0
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
213.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
212.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
211.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
211.2
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
211.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
210.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
210.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
210.3
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
198.7
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
197.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
194.6
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
193.7
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
192.8
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
186.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
183.2
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
173.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
173.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
172.6
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
170.5
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
169.3
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
169.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
166.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
166.7
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
166.5
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
165.2
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
161.4
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
159.7
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
151.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
149.0
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
148.2
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
148.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
146.8
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
145.4
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
144.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
142.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
142.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
139.8
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
135.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
131.1
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
129.6
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
128.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
124.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
122.1
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
120.5
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
118.6
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
116.7
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
113.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
112.4
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
109.4
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
101.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
101.4
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
100.6
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
98.5
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
97.1
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
86.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
85.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
83.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
81.0
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.