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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 4310.6
Min RPKM: 0.0
Std RPKM: 566.9
Median RPKM: 6.3
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
4310.6
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
2080.0
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
1782.7
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
1480.3
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
1294.2
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
1140.5
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
918.9
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
815.3
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
734.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
594.3
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
539.1
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
479.5
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
375.3
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
371.2
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
347.1
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
310.3
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
308.5
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
235.9
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
173.7
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
161.2
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
141.1
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
135.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
129.7
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
119.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
95.3
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
76.9
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
71.4
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
71.3
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
65.1
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
57.6
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
44.8
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
39.7
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
39.4
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
38.6
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
35.3
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
34.9
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
34.6
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
33.2
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
32.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
29.3
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
23.1
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
17.1
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
13.2
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
12.2
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
8.7
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
7.1
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
6.7
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
6.4
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
6.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
4.3
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
3.6
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
3.0
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
2.7
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
2.5
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
2.2
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
2.2
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
2.1
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
1.5
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
1.3
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
1.2
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
0.9
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
0.9
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
0.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
0.8
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
0.8
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
0.7
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
0.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
0.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
0.6
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
0.6
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
0.6
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
0.6
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
0.5
GTEX-QCQG-1226-SM-48U23
50-59 years, female
0.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
0.5
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
0.5
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
0.4
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
0.3
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
0.3
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
0.3
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
0.2
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
0.2
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
0.2
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
0.2
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
0.2
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
0.2
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
0.2
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
0.2
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
0.1
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
0.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
0.1
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
0.0
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
0.0
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
0.0
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
0.0
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
0.0
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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