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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 724
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 540.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 216.1
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 1359.5
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 1178.3
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 665.6
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 731.1
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 781.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 1381.6
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1754.6
Min RPKM: 160.5
Std RPKM: 340.9
Median RPKM: 818.0
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
1754.6
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
1683.9
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
1666.5
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
1628.9
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
1593.2
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
1588.6
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
1572.0
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
1542.6
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
1534.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
1514.3
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
1508.4
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
1456.4
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
1453.2
GTEX-13112-0226-SM-5P9IV
50-59 years, male
1423.0
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
1367.8
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
1347.1
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
1324.7
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
1317.8
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
1317.2
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
1304.3
GTEX-11OF3-1826-SM-5987N
60-69 years, male
1283.6
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
1254.8
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
1240.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
1237.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
1235.7
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
1234.6
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
1229.2
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
1199.2
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
1178.8
GTEX-13111-1526-SM-5EGJX
50-59 years, male
1178.6
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
1177.4
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
1174.3
GTEX-S95S-1126-SM-4B64E
60-69 years, male
1169.9
GTEX-REY6-0126-SM-48FDT
60-69 years, male
1152.9
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
1151.7
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
1148.6
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
1146.6
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
1141.8
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
1111.0
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
1110.3
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
1107.1
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
1095.9
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
1090.4
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
1090.2
GTEX-V955-1926-SM-4KL1L
60-69 years, male
1083.9
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
1079.1
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
1076.4
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
1072.5
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
1070.1
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
1054.8
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
1051.9
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
1051.4
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
1048.9
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
1048.9
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
1037.8
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
1023.9
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
1023.2
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
1009.6
GTEX-Y111-2426-SM-4TT23
50-59 years, male
995.4
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
990.2
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
982.9
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
978.3
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
976.7
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
968.7
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
957.9
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
950.9
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
948.7
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
947.1
GTEX-QLQW-1026-SM-447A9
30-39 years, male
943.4
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
935.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
934.1
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
908.6
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
903.6
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
902.2
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
892.7
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
889.5
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
881.6
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
880.3
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
877.6
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
875.5
GTEX-12696-0226-SM-5EGL3
60-69 years, male
849.4
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
842.7
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
840.7
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
838.9
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
829.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
827.9
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
808.0
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
803.2
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
802.2
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
800.8
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
800.6
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
788.4
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
787.8
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
778.9
GTEX-R55D-0126-SM-48FEL
50-59 years, male
777.5
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
773.3
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
762.3
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
758.4
GTEX-XPT6-1626-SM-4B655
20-29 years, male
756.6
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
755.6
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
752.7
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
751.1
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
740.0
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
739.4
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
738.4
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
734.7
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
733.9
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
729.2
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
724.8
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
717.2
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
716.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
715.4
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
710.8
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
708.5
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
695.8
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
693.0
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
690.3
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
682.9
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
682.7
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
681.9
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
680.9
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
672.2
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
661.8
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
658.2
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
658.2
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
647.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
640.7
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
636.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
635.9
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
634.2
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
634.0
GTEX-R55C-1426-SM-48FED
40-49 years, male
631.2
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
624.6
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
615.9
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
605.5
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
592.5
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
579.4
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
576.5
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
565.3
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
560.5
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
555.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
552.9
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
548.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
536.5
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
533.7
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
529.9
GTEX-X261-2326-SM-4PQYU
50-59 years, male
522.6
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
520.2
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
518.0
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
508.8
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
494.4
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
473.4
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
454.8
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
451.7
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
450.0
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
434.9
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
427.2
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
423.3
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
400.6
GTEX-RN64-2326-SM-48FDW
50-59 years, male
382.9
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
373.3
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
370.2
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
331.0
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
328.3
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
319.1
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
312.7
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
309.1
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
282.2
GTEX-S33H-0126-SM-4AD62
30-39 years, male
258.6
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
225.6
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
168.2
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
160.5
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.