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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 349.1
Min RPKM: 32.7
Std RPKM: 60.7
Median RPKM: 131.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
349.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
333.6
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
321.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
306.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
299.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
269.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
257.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
242.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
238.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
233.6
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
203.1
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
202.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
202.2
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
201.6
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
201.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
190.6
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
190.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
184.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
181.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
180.2
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
179.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
176.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
175.2
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
170.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
169.0
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
167.5
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
166.9
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
166.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
166.0
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
165.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
165.2
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
164.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
162.0
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
161.2
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
160.5
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
159.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
158.9
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
157.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
151.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
151.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
151.1
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
148.1
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
145.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
141.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
141.2
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
140.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
139.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
138.3
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
137.8
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
136.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
133.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
132.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
130.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
130.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
129.8
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
126.9
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
125.3
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
124.8
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
123.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
122.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
122.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
122.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
121.0
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
120.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
120.1
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
119.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
114.9
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
113.3
GTEX-R55G-0226-SM-48FEI
40-49 years, female
111.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
111.2
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
111.1
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
106.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
106.0
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
105.8
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
104.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
103.0
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
101.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
100.1
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
99.0
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
96.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
96.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
95.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
95.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
94.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
92.6
GTEX-QV31-0126-SM-447BP
30-39 years, male
92.3
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
91.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
91.6
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
91.2
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
88.9
GTEX-PX3G-0926-SM-48U12
20-29 years, female
86.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
85.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
85.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
83.8
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
80.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
78.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
77.1
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
76.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
74.7
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
69.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
63.3
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
52.1
GTEX-X585-1826-SM-4QAS3
50-59 years, male
35.5
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
32.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.