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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 18927
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 21747.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 17607.3
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 17463
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 16467.4
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 18060
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 23567.4
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 23294
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 25956.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 31386.3
Min RPKM: 5601.4
Std RPKM: 4636.7
Median RPKM: 15197.1
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
31386.3
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
30241.5
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
28668.5
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
27636.0
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
27344.6
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
27002.4
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
26685.0
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
25994.4
GTEX-RN64-2326-SM-48FDW
50-59 years, male
25942.0
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
25321.9
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
23985.3
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
22863.9
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
22609.1
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
22538.4
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
22192.1
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
21852.2
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
21711.3
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
21558.6
GTEX-X261-2326-SM-4PQYU
50-59 years, male
21392.1
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
21077.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
20799.9
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
20587.3
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
20368.8
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
20304.6
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
20258.9
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
20170.9
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
20089.6
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
20077.2
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
19902.0
GTEX-13111-1526-SM-5EGJX
50-59 years, male
19800.6
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
19621.4
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
19491.9
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
19414.6
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
19234.2
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
19176.1
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
19138.2
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
19127.9
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
18833.6
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
18809.7
GTEX-XPT6-1626-SM-4B655
20-29 years, male
18753.2
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
18347.0
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
18323.4
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
18189.9
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
18186.1
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
18143.6
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
18017.7
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
18002.2
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
17920.0
GTEX-R55C-1426-SM-48FED
40-49 years, male
17804.6
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
17791.1
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
17773.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
17590.5
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
17517.3
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
17453.2
GTEX-V955-1926-SM-4KL1L
60-69 years, male
17395.1
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
17341.1
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
17310.3
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
17267.4
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
17188.6
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
17179.1
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
17028.8
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
16823.3
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
16812.5
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
16670.9
GTEX-S95S-1126-SM-4B64E
60-69 years, male
16476.8
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
16380.0
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
16305.9
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
16192.4
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
16165.6
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
16149.1
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
16119.3
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
16021.0
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
15983.9
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
15899.2
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
15884.5
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
15866.9
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
15829.4
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
15732.3
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
15659.5
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
15581.3
GTEX-11OF3-1826-SM-5987N
60-69 years, male
15547.3
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
15524.0
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
15520.8
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
15513.1
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
15490.3
GTEX-11DXZ-2126-SM-59881
50-59 years, male
15228.2
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
15166.0
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
15081.2
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
15033.3
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
14956.3
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
14869.7
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
14829.5
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
14809.2
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
14721.4
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
14642.1
GTEX-Y111-2426-SM-4TT23
50-59 years, male
14452.3
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
14433.8
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
14409.8
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
14404.6
GTEX-S33H-0126-SM-4AD62
30-39 years, male
14321.9
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
14278.7
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
14264.8
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
14228.5
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
14208.8
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
14156.5
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
14090.6
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
14008.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
13943.3
GTEX-QLQW-1026-SM-447A9
30-39 years, male
13853.2
GTEX-117XS-2026-SM-5GID1
60-69 years, male
13772.8
GTEX-REY6-0126-SM-48FDT
60-69 years, male
13768.6
GTEX-13112-0226-SM-5P9IV
50-59 years, male
13735.7
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
13728.9
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
13556.8
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
13489.3
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
13372.8
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
13243.3
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
13106.0
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
13008.5
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
13002.5
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
12994.9
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
12977.3
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
12974.9
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
12964.1
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
12863.8
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
12826.2
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
12819.2
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
12814.1
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
12801.5
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
12793.1
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
12374.2
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
12336.0
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
12293.9
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
12083.1
GTEX-R55D-0126-SM-48FEL
50-59 years, male
12078.2
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
11989.1
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
11980.8
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
11920.4
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
11804.1
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
11754.0
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
11683.9
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
11626.9
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
11586.4
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
11559.7
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
11457.1
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
11417.7
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
11276.1
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
11155.5
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
11125.3
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
11110.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
10920.2
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
10832.2
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
10743.4
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
10731.3
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
10674.9
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
10522.3
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
10425.1
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
10166.2
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
9845.0
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
9834.8
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
9682.2
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
9522.3
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
9272.6
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
9134.1
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
8886.2
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
8847.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
8839.3
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
8524.6
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
8263.8
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
7973.6
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
7880.3
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
5601.4
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.