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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 87707.8
Min RPKM: 7507.7
Std RPKM: 17379.9
Median RPKM: 38088.2
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
87707.8
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
82250.9
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
80250.0
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
76163.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
74836.9
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
73143.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
68933.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
67852.6
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
65386.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
65365.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
64953.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
64913.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
62567.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
62386.2
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
61639.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
61595.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
57493.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
57232.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
57058.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
56761.8
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
55892.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
52847.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
52572.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
52506.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
51477.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
51461.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
51169.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
50818.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
49525.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
48961.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
47781.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
46833.9
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
46623.6
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
45588.6
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
44878.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
44385.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
42444.3
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
42347.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
41828.7
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
41428.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
41206.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
41129.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
40766.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
40068.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
38477.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
38377.2
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
38254.7
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
37921.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
37692.5
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
37373.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
36228.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
35874.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
35647.4
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
35531.4
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
35029.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
34778.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
34435.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
34384.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
33928.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
33650.3
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
33374.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
33171.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
33140.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
32712.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
32494.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
32458.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
31664.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
31308.6
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
30676.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
29457.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
28451.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
27919.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
27848.1
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
27418.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
26920.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
25338.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
25139.9
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
23711.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
23094.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
22586.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
22390.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
21671.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
21251.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
21000.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
20419.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
19987.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
19466.5
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
18792.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
18348.9
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
15304.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
14813.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
13495.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
10843.6
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
7507.7
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.