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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 62173.4
Min RPKM: 6820.7
Std RPKM: 12071.4
Median RPKM: 30085.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
62173.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
60958.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
56240.9
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
55104.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
54852.8
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
54447.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
53458.6
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
53349.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
51115.9
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
49040.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
47233.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
46767.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
46027.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
45695.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
45271.0
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
43866.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
42948.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
41494.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
41364.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
41029.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
40596.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
40572.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
40560.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
40416.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
40387.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
40363.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
40266.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
40230.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
40222.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
39987.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
39584.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
38369.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
38319.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
38110.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
38004.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
37574.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
36542.4
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
36281.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
35731.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
35626.6
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
35562.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
35496.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
34326.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
34133.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
34131.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
33508.8
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
33357.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
33051.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
32984.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
32691.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
31471.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
30866.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
30776.8
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
30722.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
30702.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
30690.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
30447.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
30287.1
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
30085.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
29863.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
29832.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
29614.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
29335.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
29042.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
28942.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
28579.4
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
28250.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
28015.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
27954.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
27401.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
27371.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
26857.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
26759.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
26421.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
26080.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
26072.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
25796.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
25736.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
25572.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
25116.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
24871.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
24814.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
24641.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
23921.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
23440.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
23209.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
23193.2
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
23155.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
22569.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
22370.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
22182.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
21596.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
21288.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
21084.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
21005.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
20565.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
20387.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
20171.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
19474.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
18923.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
18699.8
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
17537.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
17532.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
16186.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
14887.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
14598.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
14457.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
14017.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
13312.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
13220.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
9815.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
9788.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
9200.1
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
8712.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
7762.9
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
7503.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
6820.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.