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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 16990
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 19409.8
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 31159.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 12095.2
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 11959.5
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 20564.9
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 22392.9
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 7205.3
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 99022.7
Min RPKM: 872.2
Std RPKM: 16715.6
Median RPKM: 25748.4
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
99022.7
GTEX-11GSP-0626-SM-5986T
60-69 years, female
70483.6
GTEX-11ZUS-2526-SM-59872
30-39 years, male
70246.2
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
67693.4
GTEX-13112-1426-SM-5EGH8
50-59 years, male
67516.3
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
61220.4
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
56178.8
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
55738.6
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
55184.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
55123.1
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
53847.5
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
52911.8
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
52251.6
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
52161.3
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
51672.9
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
51629.2
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
50342.7
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
49324.3
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
48991.2
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
48903.5
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
47900.5
GTEX-X261-1726-SM-4PQYT
50-59 years, male
47595.6
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
46414.6
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
46087.0
GTEX-YECK-1926-SM-4W21H
60-69 years, male
44746.7
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
44235.1
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
43263.3
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
43053.7
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
42725.6
GTEX-RU72-1426-SM-46MUF
50-59 years, female
42398.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
40847.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
40762.1
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
40646.4
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
40038.8
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
39981.7
GTEX-RN64-1826-SM-48FDV
50-59 years, male
38899.9
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
38862.6
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
38090.1
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
37682.7
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
37409.8
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
37007.7
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
36357.9
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
36023.5
GTEX-1399T-0826-SM-5IFES
60-69 years, male
35956.2
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
35838.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
35753.8
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
35285.2
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
34999.0
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
34597.3
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
33607.1
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
33394.6
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
32733.5
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
31930.1
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
31239.0
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
31050.5
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
30977.7
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
30893.0
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
30866.0
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
28188.1
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
25748.4
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
25637.6
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
25449.7
GTEX-S33H-1626-SM-4AD68
30-39 years, male
24866.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
24483.2
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
24263.4
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
24176.6
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
24027.7
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
23835.2
GTEX-P78B-1326-SM-3P611
40-49 years, female
23562.9
GTEX-QESD-2026-SM-447BI
20-29 years, male
22501.4
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
22448.2
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
22412.9
GTEX-13113-1326-SM-5GCOI
60-69 years, female
22377.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
22043.7
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
21899.2
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
21856.5
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
21702.0
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
19854.2
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
19375.5
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
19127.5
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
18900.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
18555.8
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
18336.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
17511.4
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
17492.8
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
17363.8
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
17073.4
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
16965.8
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
16224.8
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
16164.3
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
16107.7
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
15989.4
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
15881.4
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
15754.3
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
15741.5
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
15733.1
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
15580.1
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
15500.5
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
15427.6
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
15410.1
GTEX-QEL4-1226-SM-447A4
50-59 years, male
15324.8
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
15157.6
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
14945.6
GTEX-REY6-1226-SM-48FDR
60-69 years, male
14851.1
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
14726.5
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
14657.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
14240.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
13830.8
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
12815.0
GTEX-Q734-0326-SM-48U15
40-49 years, female
12781.2
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
12513.9
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
12053.6
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
11381.3
GTEX-S32W-1926-SM-4AD63
50-59 years, female
11331.8
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
11307.1
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
10670.0
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
9530.9
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
9360.9
GTEX-R53T-0326-SM-48FEC
50-59 years, female
872.2
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
