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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 9792.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 10161
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 6309.4
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 10968.5
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 8212.5
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 10972.5
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 7967.3
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 9493.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 10844.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 24313.8
Min RPKM: 4669.4
Std RPKM: 3246.7
Median RPKM: 9776.7
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
24313.8
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
19117.5
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
18613.3
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
18287.2
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
18201.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
17917.4
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
17696.1
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
17484.9
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
17372.1
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
16359.7
GTEX-RN64-2326-SM-48FDW
50-59 years, male
15911.2
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
15284.9
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
15183.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
14861.2
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
14547.9
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
14475.2
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
14334.9
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
14288.5
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
14141.4
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
14074.7
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
13966.6
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
13902.7
GTEX-12696-0226-SM-5EGL3
60-69 years, male
13885.2
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
13847.9
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
13810.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
13652.0
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
13540.8
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
13464.3
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
13387.4
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
13128.9
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
13033.4
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
12965.1
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
12795.2
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
12746.4
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
12742.9
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
12531.4
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
12423.3
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
12299.5
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
12276.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
12214.4
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
12161.3
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
12040.6
GTEX-R55C-1426-SM-48FED
40-49 years, male
12030.7
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
12016.2
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
11972.2
GTEX-R55D-0126-SM-48FEL
50-59 years, male
11887.5
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
11850.4
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
11844.6
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
11805.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
11719.5
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
11661.7
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
11514.4
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
11367.5
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
11307.0
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
11154.3
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
11148.7
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
11088.5
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
11072.0
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
11069.5
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
10959.6
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
10948.2
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
10874.5
GTEX-X261-2326-SM-4PQYU
50-59 years, male
10831.8
GTEX-V955-1926-SM-4KL1L
60-69 years, male
10735.6
GTEX-S95S-1126-SM-4B64E
60-69 years, male
10723.6
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
10677.9
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
10621.5
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
10576.4
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
10523.1
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
10508.0
GTEX-XPT6-1626-SM-4B655
20-29 years, male
10472.7
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
10456.3
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
10453.3
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
10369.2
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
10306.0
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
10287.0
GTEX-QLQW-1026-SM-447A9
30-39 years, male
10241.3
GTEX-13111-1526-SM-5EGJX
50-59 years, male
10128.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
10086.8
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
9922.8
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
9914.9
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
9888.7
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
9828.2
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
9815.2
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
9798.0
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
9790.4
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
9763.0
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
9521.2
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
9498.0
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
9317.4
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
9302.0
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
9287.1
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
9273.6
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
9266.6
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
9213.3
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
9208.4
GTEX-REY6-0126-SM-48FDT
60-69 years, male
9202.4
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
9160.1
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
9111.5
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
9027.7
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
9011.6
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
8937.5
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
8904.4
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
8877.7
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
8825.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
8753.3
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
8748.9
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
8731.2
GTEX-Y111-2426-SM-4TT23
50-59 years, male
8723.1
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
8683.0
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
8668.2
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
8632.0
GTEX-13112-0226-SM-5P9IV
50-59 years, male
8537.2
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
8398.3
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
8375.7
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
8372.9
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
8314.1
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
8187.2
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
8178.3
GTEX-S33H-0126-SM-4AD62
30-39 years, male
8167.2
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
8149.0
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
8066.1
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
8043.8
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
8040.1
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
7988.1
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
7965.6
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
7962.0
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
7954.3
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
7950.7
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
7925.5
GTEX-11OF3-1826-SM-5987N
60-69 years, male
7917.1
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
7879.7
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
7851.1
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
7835.9
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
7834.8
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
7806.8
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
7743.1
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
7735.7
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
7706.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
7643.7
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
7634.2
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
7572.7
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
7426.9
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
7421.5
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
7410.5
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
7351.5
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
7344.6
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
7294.1
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
7292.5
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
7137.8
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
7119.3
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
7063.5
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
6982.1
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
6904.1
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
6836.8
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
6732.1
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
6688.8
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
6576.5
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
6491.6
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
6228.7
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
6050.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
6042.8
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
5854.2
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
5847.1
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
5515.6
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
5484.9
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
5296.5
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
5258.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
5120.8
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
4961.4
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
4877.2
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
4669.4
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.