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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 15760.0
Min RPKM: 2692.0
Std RPKM: 2769.9
Median RPKM: 6321.4
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
15760.0
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
15217.8
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
13129.9
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
12420.2
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
11102.5
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
11025.8
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
10777.1
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
9728.6
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
9675.9
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
8888.1
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
8584.4
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
8569.2
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
8480.5
GTEX-Y111-2626-SM-4TT24
50-59 years, male
8076.6
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
7903.2
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
7864.3
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
7279.1
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
6980.8
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
6673.9
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
6614.1
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
6541.9
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
6519.5
GTEX-13113-1526-SM-5EGHV
60-69 years, female
6484.4
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
6405.9
GTEX-13O21-1926-SM-5MR39
50-59 years, male
6402.7
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
6398.6
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
6397.0
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
6341.6
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
6321.4
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
6293.8
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
6149.7
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
6132.7
GTEX-11P82-0926-SM-5986X
20-29 years, male
5911.0
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
5806.4
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
5683.7
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
5640.8
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
5586.2
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
5518.6
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
5408.0
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
5350.1
GTEX-1445S-2926-SM-5O993
60-69 years, male
5284.9
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
5249.0
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
5143.1
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
5128.0
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
4984.7
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
4880.9
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
4838.7
GTEX-X261-2426-SM-4PQZU
50-59 years, male
4313.6
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
4301.2
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
4227.7
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
4088.8
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
3946.8
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
3866.3
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
3791.5
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
3685.1
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
3062.6
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
2692.0
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.