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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 10221.4
Min RPKM: 131.5
Std RPKM: 2052.0
Median RPKM: 2962.8
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
10221.4
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
9358.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
7290.5
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
7256.8
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
6911.8
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
6406.9
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
6357.8
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
6112.5
GTEX-QCQG-1426-SM-48U22
50-59 years, female
5791.6
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
5742.5
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
5710.4
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
5642.3
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
5540.1
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
5527.2
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
5442.1
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
5253.8
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
5121.1
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
4798.4
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
4798.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
4375.5
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
4359.4
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
4339.3
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
4238.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
4234.7
GTEX-11I78-1926-SM-59878
50-59 years, female
4225.8
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
3976.0
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
3926.4
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
3810.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
3806.1
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
3798.1
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
3787.1
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
3687.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
3636.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
3563.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
3534.6
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
3497.2
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
3479.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
3461.8
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
3390.6
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
3387.4
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
3370.8
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
3308.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
3240.3
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
3238.6
GTEX-S341-0726-SM-4AD5R
40-49 years, female
3143.8
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
3141.9
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
3083.9
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
2981.4
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
2962.8
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
2936.1
GTEX-S32W-1226-SM-4AD67
50-59 years, female
2799.2
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
2798.8
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
2765.0
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
2753.0
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
2700.2
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
2669.8
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
2536.6
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
2387.1
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
2335.8
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
2019.2
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
1986.0
GTEX-Q734-0726-SM-48TZP
40-49 years, female
1953.9
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1924.9
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1848.1
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
1812.2
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1798.6
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1780.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
1728.9
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1658.1
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1647.7
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1520.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1492.3
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1434.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1369.2
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1223.0
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1217.5
GTEX-P78B-1926-SM-3P616
40-49 years, female
1170.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1167.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
1166.1
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1127.9
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1074.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
958.0
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
931.0
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
702.6
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
675.3
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
623.1
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
516.0
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
465.7
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
463.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
436.3
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
425.8
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
384.0
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
383.9
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
369.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
351.6
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
281.3
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
131.5
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.