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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 50015.0
Min RPKM: 7408.3
Std RPKM: 9748.2
Median RPKM: 20506.1
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
50015.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
48534.6
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
44019.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
43276.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
41930.8
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
39020.0
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
38555.9
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
38288.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
37004.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
36467.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
36394.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
35909.3
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
33858.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
33295.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
32798.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
32757.3
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
31647.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
31074.9
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
29971.1
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
29947.8
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
29555.1
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
29452.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
29452.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
28229.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
28092.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
27925.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
26918.9
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
26047.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
25435.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
25204.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
25167.9
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
25148.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
25116.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
24213.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
24192.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
23098.2
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
22924.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
22909.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
22611.5
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
22500.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
22476.7
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
21875.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
21608.5
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
21410.8
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
21337.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
20914.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
20742.2
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
20270.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
20020.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
19883.0
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
19853.3
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
19753.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
19252.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
19171.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
18826.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
18683.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
18681.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
18409.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
17933.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
17358.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
16524.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
16372.3
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
16242.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
16173.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
15594.7
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
15490.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
15243.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
15178.1
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
14947.8
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
14890.7
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
14857.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
14791.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
14757.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
14392.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
13420.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
13307.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
13259.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
13191.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
13143.8
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
13102.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
12896.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
11772.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
11403.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
11388.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
11032.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
10881.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
10447.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
10085.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
9533.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
9317.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
8366.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
7619.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
7591.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
7408.3
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.