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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 10826
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 38960.8
Min RPKM: 3264.5
Std RPKM: 6528.5
Median RPKM: 21121.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
38960.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
37968.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
37025.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
34838.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
34218.5
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
33696.3
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
32216.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
32155.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
32116.4
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
32006.2
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
31570.9
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
30750.9
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
30630.7
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
30040.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
29917.7
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
29737.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
29699.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
29316.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
28901.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
28620.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
28494.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
28333.6
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
27681.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
27645.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
27314.8
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
27253.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
27158.6
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
27058.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
26850.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
26742.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
26566.3
GTEX-145MF-2726-SM-5O995
50-59 years, male
26497.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
26267.7
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
26149.8
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
25296.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
25239.8
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
25056.2
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
24914.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
24616.0
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
24437.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
24236.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
24034.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
23518.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
23482.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
23273.4
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
23191.9
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
22796.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
22756.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
22691.7
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
22580.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
22499.6
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
22377.6
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
22355.2
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
21948.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
21471.4
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
21153.1
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
21126.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
21117.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
21117.3
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
20976.4
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
20960.0
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
20483.5
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
20307.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
20221.0
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
19952.8
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
19945.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
19926.3
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
19688.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
19575.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
19476.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
19331.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
19181.0
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
19164.8
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
19078.3
GTEX-144FL-3026-SM-5O99C
50-59 years, male
19036.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
18860.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
18660.2
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
18619.7
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
18481.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
18481.4
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
17852.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
17838.2
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
17700.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
17446.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
17422.1
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
17417.4
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
17410.6
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
17309.6
GTEX-11PRG-2926-SM-5987A
50-59 years, male
17295.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
16928.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
16541.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
16478.6
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
15770.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
15695.2
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
15678.5
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
15400.9
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
15303.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
15292.6
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
15211.9
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
15002.8
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
14996.2
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
14896.0
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
14884.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
14798.2
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
14391.2
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
14021.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
13547.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
13434.3
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
12922.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
12872.9
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
12831.4
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
11340.5
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
7511.9
GTEX-X585-3026-SM-46MWF
50-59 years, male
3264.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 16901.3
Samples: 108
Max RPKM: 39280.0
Min RPKM: 2440.3
Std RPKM: 7970.7
Median RPKM: 15851.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
39280.0
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
38375.8
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
37714.2
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
37702.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
37693.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
36996.3
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
33071.8
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
32925.0
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
29949.4
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
28605.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
28198.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
27835.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
27718.4
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
26780.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
26443.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
26329.1
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
26130.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
25018.1
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
24089.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
23408.6
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
22846.3
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
22713.0
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
20412.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
20072.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
19847.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
19781.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
19416.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
19412.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
19151.6
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
19066.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
19036.1
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
18997.6
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
18905.1
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
18612.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
18507.6
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
18263.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
17896.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
17863.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
17859.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
17854.7
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
17601.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
17466.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
17309.9
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
16580.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
16507.8
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
16471.8
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
16439.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
16398.6
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
16338.1
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
16263.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
16123.5
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
16007.4
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
15901.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
15853.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
15849.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
15513.3
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
14922.0
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
14450.5
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
14145.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
14063.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
13965.7
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
13669.9
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
13639.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
13546.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
13286.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
13268.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
13266.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
13204.7
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
13099.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
13093.8
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
13052.1
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
12820.5
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
12811.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
12806.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
12651.4
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
12591.5
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
12513.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
12240.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
12045.2
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
12026.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
11617.1
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
11449.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
11272.3
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
10860.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
10654.0
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
10517.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
10345.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
10081.7
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
10008.8
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
9883.3
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
9397.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
9381.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
9209.0
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
9107.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
9083.5
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
9047.7
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
8816.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
8651.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
8612.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
8472.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
7596.0
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
7259.9
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
6731.6
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
6412.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
6143.9
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
5876.5
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
5818.9
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
2440.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.