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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 46382.8
Min RPKM: 10428.3
Std RPKM: 8305.3
Median RPKM: 20818.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
46382.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
43629.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
42721.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
42166.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
41020.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
40514.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
40307.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
36777.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
35999.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
35303.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
34453.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
34158.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
33995.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
33736.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
33603.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
33493.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
33226.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
32809.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
32279.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
31674.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
31336.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
30995.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
30397.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
30321.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
30142.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
30080.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
29645.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
29012.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
28899.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
28387.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
28091.2
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
27939.8
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
27702.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
27273.9
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
26989.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
26551.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
25977.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
25109.4
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
24797.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
24549.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
24467.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
24431.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
24129.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
23771.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
23637.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
23517.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
22922.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
22890.1
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
22664.8
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
21952.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
21949.8
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
21775.3
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
21755.0
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
21123.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
20995.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
20952.6
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
20888.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
20858.9
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
20818.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
20813.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
20546.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
20499.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
20440.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
20415.3
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
20290.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
20194.5
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
20024.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
19936.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
19830.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
19450.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
19212.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
19208.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
19036.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
19021.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
18948.9
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
18867.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
18849.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
18247.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
18047.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
17894.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
17767.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
17642.0
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
17500.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
17387.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
17332.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
17285.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
16893.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
16812.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
16493.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
16457.9
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
16452.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
16308.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
16128.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
15858.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
15535.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
15468.8
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
15011.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
14686.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
14472.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
14389.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
14291.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
14219.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
13581.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
13313.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
13127.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
12632.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
12505.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
12451.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
12240.9
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
12227.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
11781.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
11700.0
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
11461.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
11195.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
10956.1
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
10772.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
10428.3
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.