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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 11568
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 7455.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 9035.2
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 11429.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 11166.4
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 11968.2
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 13309.7
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 12621.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 13435.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 25693.0
Min RPKM: 6323.5
Std RPKM: 4076.2
Median RPKM: 13251.2
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
25693.0
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
25460.2
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
23104.3
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
22678.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
22373.5
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
22348.1
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
21916.0
GTEX-RN64-2326-SM-48FDW
50-59 years, male
21870.5
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
21490.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
21323.5
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
21207.0
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
21097.7
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
20064.5
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
20058.1
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
19832.7
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
19761.5
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
19694.1
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
19249.0
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
19217.7
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
19160.6
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
19148.1
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
19067.9
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
18771.8
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
18766.4
GTEX-13111-1526-SM-5EGJX
50-59 years, male
18634.7
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
18526.4
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
18340.2
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
18172.0
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
17943.5
GTEX-XPT6-1626-SM-4B655
20-29 years, male
17901.3
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
17858.5
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
17761.7
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
17533.7
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
17452.6
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
17258.8
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
17167.0
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
17117.3
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
17067.4
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
17062.1
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
16923.2
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
16749.5
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
16661.6
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
16659.5
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
16637.4
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
16585.5
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
16541.2
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
16531.9
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
16530.9
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
16474.6
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
16371.9
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
15968.1
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
15895.6
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
15676.6
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
15437.1
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
15248.0
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
15225.1
GTEX-X261-2326-SM-4PQYU
50-59 years, male
15120.1
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
15093.2
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
15070.2
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
14811.5
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
14745.2
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
14731.2
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
14558.8
GTEX-S95S-1126-SM-4B64E
60-69 years, male
14492.9
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
14462.9
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
14459.0
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
14433.9
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
14380.6
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
14247.1
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
14194.1
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
14090.5
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
14087.5
GTEX-11DXZ-2126-SM-59881
50-59 years, male
14030.6
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
13964.5
GTEX-R55C-1426-SM-48FED
40-49 years, male
13934.4
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
13925.6
GTEX-R55D-0126-SM-48FEL
50-59 years, male
13791.3
GTEX-12696-0226-SM-5EGL3
60-69 years, male
13654.5
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
13606.4
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
13540.8
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
13464.9
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
13405.3
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
13353.1
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
13349.1
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
13323.9
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
13254.4
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
13248.0
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
13179.6
GTEX-QLQW-1026-SM-447A9
30-39 years, male
13146.1
GTEX-S33H-0126-SM-4AD62
30-39 years, male
13129.6
GTEX-11OF3-1826-SM-5987N
60-69 years, male
12984.0
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
12925.6
GTEX-V955-1926-SM-4KL1L
60-69 years, male
12852.9
GTEX-117XS-2026-SM-5GID1
60-69 years, male
12823.2
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
12799.6
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
12797.8
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
12741.1
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
12674.5
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
12560.7
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
12534.4
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
12514.3
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
12494.7
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
12459.1
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
12396.3
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
12391.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
12317.1
GTEX-Y111-2426-SM-4TT23
50-59 years, male
12199.4
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
12182.2
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
12174.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
12137.8
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
11795.5
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
11611.6
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
11587.7
GTEX-REY6-0126-SM-48FDT
60-69 years, male
11364.2
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
11345.5
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
11343.6
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
11343.2
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
11293.0
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
11194.9
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
11142.8
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
11122.1
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
11101.7
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
11002.6
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
10978.3
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
10967.7
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
10951.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
10916.3
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
10857.9
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
10838.7
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
10792.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
10762.7
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
10699.8
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
10571.7
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
10379.2
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
10344.3
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
10287.7
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
10255.3
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
10200.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
10044.2
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
9965.5
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
9918.9
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
9839.1
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
9699.1
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
9664.3
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
9603.2
GTEX-13112-0226-SM-5P9IV
50-59 years, male
9453.6
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
9428.0
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
9400.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
9333.9
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
9286.5
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
9260.2
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
9145.9
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
9102.4
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
9088.0
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
9053.0
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
8989.2
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
8813.5
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
8782.3
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
8770.6
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
8379.7
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
8244.2
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
8154.2
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
8044.7
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
8024.4
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
8012.8
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
7786.0
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
7773.9
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
7691.3
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
7204.9
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
6822.8
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
6618.7
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
6323.5
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.