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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 17083.8
Min RPKM: 286.2
Std RPKM: 4212.4
Median RPKM: 7703.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
17083.8
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
16458.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
16065.9
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
15515.7
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
14778.9
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
14184.0
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
14007.7
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
13343.8
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
13114.6
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
12978.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
12192.4
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
11971.0
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
11839.9
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
11814.2
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
11627.0
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
11441.8
GTEX-QCQG-1426-SM-48U22
50-59 years, female
11437.5
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
11199.0
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
11126.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
11020.3
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
10761.6
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
10755.8
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
10624.8
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
10070.5
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
9894.4
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
9676.2
GTEX-S32W-1226-SM-4AD67
50-59 years, female
9655.8
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
9590.9
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
9574.5
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
9444.2
GTEX-11I78-1926-SM-59878
50-59 years, female
9392.2
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
9248.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
9237.9
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
9230.0
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
9196.3
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
9187.2
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
9179.6
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
9146.6
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
9144.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
8944.2
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
8917.8
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
8868.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
8808.3
GTEX-S341-0726-SM-4AD5R
40-49 years, female
8787.0
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
8647.4
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
8535.6
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
8300.9
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
7930.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
7703.0
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
7585.8
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
7415.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
7287.6
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
7273.9
GTEX-Q734-0726-SM-48TZP
40-49 years, female
7154.4
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
7143.0
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
7111.4
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
7073.9
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
6932.3
GTEX-P78B-1926-SM-3P616
40-49 years, female
6775.7
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
6494.6
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
6385.8
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
6031.9
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
5984.1
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
5943.1
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
5808.8
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
5585.4
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
5177.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
5169.9
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
5059.1
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
4001.6
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
3876.7
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
3731.6
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
3590.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
3070.2
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
2925.0
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
2442.0
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
2380.2
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
2363.4
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
2362.2
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
2313.5
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
2226.9
GTEX-RU72-2226-SM-46MUE
50-59 years, female
2196.7
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
2066.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
2027.6
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
2022.3
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1921.6
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1682.4
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1574.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1244.4
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1194.2
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1079.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
998.0
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
966.5
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
694.1
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
604.2
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
543.0
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
286.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.