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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 78236.3
Min RPKM: 12771.9
Std RPKM: 16399.2
Median RPKM: 35385.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
78236.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
77439.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
75229.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
72638.3
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
71578.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
68623.8
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
68229.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
65581.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
59509.8
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
59472.6
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
59275.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
59044.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
57353.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
55468.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
55010.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
54373.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
52552.4
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
52415.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
50424.0
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
49127.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
47888.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
47686.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
47021.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
46745.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
45934.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
45644.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
45330.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
44964.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
43859.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
42432.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
40904.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
40691.2
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
40515.2
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
39643.0
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
39512.6
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
38614.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
38078.6
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
38025.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
37951.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
37509.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
37378.7
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
36576.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
36545.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
36470.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
36364.6
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
36187.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
35476.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
35294.4
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
35020.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
34604.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
33315.5
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
33124.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
32815.9
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
31916.5
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
31725.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
30357.7
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
29877.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
29569.3
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
28764.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
28272.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
27701.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
27698.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
25790.5
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
25454.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
24419.9
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
24262.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
24088.3
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
23543.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
23486.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
23419.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
23315.0
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
22939.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
22709.3
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
22531.9
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
22512.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
22340.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
21390.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
21346.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
19623.1
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
19162.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
18766.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
18299.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
17692.4
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
17562.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
17267.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
17142.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
16592.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
16571.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
16521.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
15321.9
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
15293.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
15125.7
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
14460.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
12771.9
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.