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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 11423.5
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 47719.8
Min RPKM: 5018.1
Std RPKM: 7617.7
Median RPKM: 27266.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
47719.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
44909.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
44277.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
43584.5
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
43152.1
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
42844.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
41778.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
41352.7
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
41089.0
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
40296.3
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
39741.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
39458.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
39041.5
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
38623.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
37230.2
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
37136.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
35008.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
34798.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
34389.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
34277.3
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
34064.8
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
33983.0
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
33952.1
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
33934.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
33882.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
33555.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
33453.2
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
32823.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
32477.1
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
32454.8
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
32381.8
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
32192.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
32166.8
GTEX-145MF-2726-SM-5O995
50-59 years, male
32083.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
31989.9
GTEX-11PRG-2926-SM-5987A
50-59 years, male
31940.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
31917.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
31879.5
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
31671.5
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
31363.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
31293.5
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
31082.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
30743.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
30456.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
30294.6
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
30243.2
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
30144.3
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
29956.7
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
29926.1
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
29582.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
29076.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
28450.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
28316.7
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
28315.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
28129.0
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
27623.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
27471.0
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
27061.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
26903.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
26782.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
26750.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
26749.5
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
26568.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
26260.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
26074.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
25983.3
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
25963.0
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
25834.3
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
25662.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
25577.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
25410.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
25273.2
GTEX-144FL-3026-SM-5O99C
50-59 years, male
24930.6
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
24922.7
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
24736.3
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
24626.0
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
24303.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
24242.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
24016.6
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
23965.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
23931.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
23812.0
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
23704.9
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
23519.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
23500.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
23499.3
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
23484.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
23468.9
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
22626.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
22172.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
22158.0
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
21696.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
21456.0
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
21345.0
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
21299.7
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
21124.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
20385.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
20288.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
20204.8
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
20164.0
GTEX-WL46-2926-SM-3LK82
50-59 years, male
20137.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
19772.9
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
19509.3
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
19044.0
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
18454.8
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
18140.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
17153.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
16701.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
15903.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
15875.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
15767.2
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
14611.6
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
13854.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
5018.1
Show all
Brain - Frontal Cortex (BA9) RPKM: 23681.8
Samples: 108
Max RPKM: 56684.8
Min RPKM: 4658.1
Std RPKM: 10750.3
Median RPKM: 21371.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
56684.8
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
55489.1
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
55488.8
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
53417.3
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
52919.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
42759.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
42243.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
42002.2
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
41891.8
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
39094.7
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
38508.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
36256.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
35961.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
35896.7
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
35443.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
35339.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
34786.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
32694.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
32408.4
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
32010.6
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
31101.5
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
31072.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
30993.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
29840.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
29547.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
29232.4
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
28767.2
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
28617.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
28510.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
28388.0
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
28285.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
28134.8
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
27832.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
27068.0
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
26637.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
26584.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
25659.8
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
25482.8
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
24383.2
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
24304.8
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
23953.2
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
23902.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
23640.0
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
23204.4
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
23141.4
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
22997.1
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
22388.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
22289.6
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
22220.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
22092.0
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
21985.4
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
21740.9
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
21633.6
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
21547.7
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
21196.1
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
20807.9
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
20743.6
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
20332.7
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
20164.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
20084.7
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
20066.2
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
19998.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
19184.3
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
19177.1
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
18935.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
18897.0
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
18851.5
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
18816.4
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
18731.3
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
18626.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
18149.8
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
18129.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
18050.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
17992.6
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
17675.2
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
17455.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
17386.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
17306.2
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
17140.7
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
16744.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
16550.5
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
16550.3
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
16261.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
16189.4
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
15999.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
15941.6
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
15764.2
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
15520.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
15113.9
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
14982.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
14980.7
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
14115.9
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
14000.8
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
13587.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
13189.4
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
12982.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
12854.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
12529.1
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
11340.1
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
11185.5
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
10990.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
10327.5
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
9395.6
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
9022.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
8890.5
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
8222.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
7366.6
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
4658.1
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CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.