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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 7403.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 6432
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 8397.7
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 5771
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 5497.3
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 7755.4
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 8698.1
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 8105.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 8996.8
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 11771.0
Min RPKM: 2136.1
Std RPKM: 1573.1
Median RPKM: 4803.9
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
11771.0
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
10566.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
9599.3
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
9366.2
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
9081.8
GTEX-RN64-2326-SM-48FDW
50-59 years, male
8831.2
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
8466.4
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
7875.2
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
7808.3
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
7645.1
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
7470.5
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
7118.9
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
7068.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
7002.8
GTEX-X261-2326-SM-4PQYU
50-59 years, male
6976.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
6974.1
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
6971.8
GTEX-13111-1526-SM-5EGJX
50-59 years, male
6960.3
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
6949.0
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
6919.8
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
6895.6
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
6870.8
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
6777.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
6767.7
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
6701.3
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
6699.5
GTEX-12696-0226-SM-5EGL3
60-69 years, male
6670.4
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
6528.8
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
6507.7
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
6372.7
GTEX-XPT6-1626-SM-4B655
20-29 years, male
6314.8
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
6279.9
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
6266.3
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
6236.9
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
6206.0
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
6114.3
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
6037.0
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
6020.3
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
5957.9
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
5892.7
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
5831.9
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
5823.8
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
5775.4
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
5772.9
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
5772.2
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
5749.2
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
5727.9
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
5724.8
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
5710.2
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
5683.7
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
5603.1
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
5537.2
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
5464.8
GTEX-QLQW-1026-SM-447A9
30-39 years, male
5424.0
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
5384.8
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
5318.7
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
5315.4
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
5312.1
GTEX-S33H-0126-SM-4AD62
30-39 years, male
5309.2
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
5213.2
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
5171.5
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
5134.1
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
5114.3
GTEX-S95S-1126-SM-4B64E
60-69 years, male
5080.0
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
5071.7
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
5057.8
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
5029.9
GTEX-R55C-1426-SM-48FED
40-49 years, male
5018.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
5016.2
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
5014.8
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
5004.9
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
5001.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
4978.1
GTEX-13112-0226-SM-5P9IV
50-59 years, male
4971.9
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
4964.0
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
4961.1
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
4956.9
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
4937.6
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
4920.5
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
4916.0
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
4911.7
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
4900.2
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
4896.3
GTEX-R55D-0126-SM-48FEL
50-59 years, male
4880.5
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
4868.9
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
4842.8
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
4764.9
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
4740.9
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
4713.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
4703.7
GTEX-11OF3-1826-SM-5987N
60-69 years, male
4684.5
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
4652.3
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
4616.1
GTEX-V955-1926-SM-4KL1L
60-69 years, male
4574.1
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
4571.0
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
4560.3
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
4558.1
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
4534.4
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
4488.6
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
4461.2
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
4385.6
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
4360.9
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
4345.8
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
4331.0
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
4317.7
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
4286.9
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
4234.7
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
4217.1
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
4195.5
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
4161.4
GTEX-117XS-2026-SM-5GID1
60-69 years, male
4117.5
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
4101.3
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
4055.8
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
4040.5
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
4035.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
4033.5
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
4022.1
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
4013.5
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
4008.8
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
4008.4
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
4002.7
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
3998.3
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
3976.6
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
3950.6
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
3933.0
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
3931.4
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
3930.9
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
3929.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
3856.9
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
3825.0
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
3816.0
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
3812.3
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
3789.1
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
3772.9
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
3728.1
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
3672.3
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
3645.0
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
3628.7
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
3624.5
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
3607.3
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
3581.0
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
3577.8
GTEX-Y111-2426-SM-4TT23
50-59 years, male
3562.2
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
3561.2
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
3532.1
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
3520.7
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
3481.5
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
3453.2
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
3444.7
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
3433.4
GTEX-11DXZ-2126-SM-59881
50-59 years, male
3432.5
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
3381.6
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
3351.2
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
3351.1
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
3293.9
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
3274.9
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
3262.9
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
3260.5
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
3257.8
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
3238.6
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
3156.6
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
3099.8
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
3089.9
GTEX-REY6-0126-SM-48FDT
60-69 years, male
3063.0
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
3043.6
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
2987.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
2863.2
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
2793.9
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
2766.2
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
2748.7
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
2573.6
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
2136.1
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.