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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 10401.3
Min RPKM: 1908.5
Std RPKM: 1850.2
Median RPKM: 4684.0
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
10401.3
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
9203.1
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
8430.5
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
8354.8
GTEX-13O21-1926-SM-5MR39
50-59 years, male
7895.7
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
7746.8
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
7600.7
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
7463.2
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
7243.4
GTEX-Y111-2626-SM-4TT24
50-59 years, male
6957.7
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
6870.0
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
6517.1
GTEX-X261-2426-SM-4PQZU
50-59 years, male
6516.3
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
6456.3
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
5906.2
GTEX-11P82-0926-SM-5986X
20-29 years, male
5894.6
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
5671.2
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
5642.4
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
5572.3
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
5478.6
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
5319.6
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
5313.6
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
5205.9
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
5034.5
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
4981.7
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
4949.5
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
4823.9
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
4749.9
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
4684.0
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
4631.7
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
4596.4
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
4559.8
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
4484.4
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
4471.5
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
4429.3
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
4427.0
GTEX-1445S-2926-SM-5O993
60-69 years, male
4359.9
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
3991.7
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
3949.4
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
3910.9
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
3872.2
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
3863.7
GTEX-13113-1526-SM-5EGHV
60-69 years, female
3807.0
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
3752.4
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
3683.9
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
3475.3
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
3368.8
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
3348.2
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
3220.8
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
3109.1
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
2904.1
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
2694.5
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
2687.5
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
2543.6
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
2362.5
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
1950.8
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
1908.5
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.