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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 29077.2
Min RPKM: 4545.6
Std RPKM: 5312.4
Median RPKM: 12743.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
29077.2
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
26245.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
26083.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
23753.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
23671.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
22174.2
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
21980.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
21914.0
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
21245.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
21206.1
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
20836.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
20222.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
20086.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
19149.1
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
19096.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
19017.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
18968.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
18933.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
18924.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
18811.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
18727.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
18088.5
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
17772.7
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
16771.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
16511.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
16481.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
16143.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
16076.1
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
16033.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
16019.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
15258.0
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
15037.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
14701.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
14677.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
14665.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
14510.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
14068.5
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
13629.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
13586.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
13377.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
13290.6
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
13195.2
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
13153.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
13101.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
12967.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
12888.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
12773.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
12712.9
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
12689.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
12504.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
12413.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
12281.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
11948.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
11858.6
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
11830.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
11613.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
11415.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
11401.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
11375.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
11374.8
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
11141.0
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
11097.9
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
11043.0
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
10684.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
10446.1
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
10130.8
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
10097.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
9788.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
9633.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
9610.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
9331.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
9235.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
9048.7
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
8859.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
8519.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
8441.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
8347.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
8267.6
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
8066.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
7999.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
7807.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
7792.7
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
7624.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
7550.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
7380.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
6818.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
6810.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
6564.9
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
6460.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
6336.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
6010.8
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
5680.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
5043.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
4545.6
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.