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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 9205.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 17443.5
Min RPKM: 1613.2
Std RPKM: 2837.8
Median RPKM: 8879.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
17443.5
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
17047.1
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
16548.0
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
14781.5
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
14682.7
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
14138.1
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
13704.1
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
13219.2
GTEX-11GSP-3226-SM-5986O
60-69 years, female
12931.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
12818.6
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
12726.7
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
12692.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
12625.0
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
12449.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
12257.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
12204.8
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
12170.2
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
12167.8
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
12123.8
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
11991.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
11880.0
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
11824.6
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
11798.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
11710.4
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
11611.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
11521.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
11502.7
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
11319.0
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
11049.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
10974.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
10949.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
10810.8
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
10772.7
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
10763.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
10730.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
10722.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
10677.4
GTEX-145MF-2726-SM-5O995
50-59 years, male
10627.4
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
10598.0
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
10361.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
9935.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
9925.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
9740.8
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
9632.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
9478.0
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
9469.7
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
9468.9
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
9456.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
9415.9
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
9305.5
GTEX-11PRG-2926-SM-5987A
50-59 years, male
9266.1
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
9248.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
9211.7
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
9169.8
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
9148.0
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
8952.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
8902.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
8856.2
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
8842.3
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
8825.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
8699.9
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
8650.9
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
8643.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
8461.8
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
8081.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
7955.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
7942.9
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
7899.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
7842.0
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
7830.4
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
7816.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
7775.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
7775.3
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
7757.6
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
7719.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
7707.3
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
7671.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
7647.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
7639.8
GTEX-1128S-2726-SM-5H12C
60-69 years, female
7623.6
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
7505.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
7360.7
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
7352.2
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
7291.6
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
7265.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
7257.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
7019.7
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
7013.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
6899.8
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
6863.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
6761.2
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
6721.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
6607.6
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
6569.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
6556.1
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
6464.5
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
6409.9
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
6400.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
6395.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
6189.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
6119.6
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
6083.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
6027.3
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
5834.3
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
5797.5
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
5483.3
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
5261.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
5137.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
4832.8
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
4785.7
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
4566.9
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
4556.9
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
4499.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
1613.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 9511.2
Samples: 108
Max RPKM: 21189.9
Min RPKM: 1589.1
Std RPKM: 4011.6
Median RPKM: 8856.2
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
21189.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
19767.4
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
19262.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
19170.0
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
18970.8
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
18232.1
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
17921.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
17440.4
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
17318.8
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
15441.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
15175.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
15129.2
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
15084.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
15010.2
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
14517.8
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
14076.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
13404.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
13173.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
13076.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
12783.6
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
12319.8
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
12217.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
12118.5
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
11922.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
11873.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
11712.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
11565.8
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
11322.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
11001.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
10982.6
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
10688.8
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
10635.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
10196.5
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
10093.6
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
10012.6
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
9957.9
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
9881.8
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
9728.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
9686.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
9618.8
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
9562.3
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
9542.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
9522.3
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
9433.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
9413.4
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
9339.2
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
9299.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
9265.1
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
9243.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
9160.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
9126.9
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
9053.9
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
8942.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
8896.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
8815.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
8745.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
8730.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
8714.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
8650.7
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
8579.0
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
8546.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
8506.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
8369.0
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
8253.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
8158.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
8117.9
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
8100.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
7958.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
7869.4
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
7864.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
7610.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
7602.8
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
7549.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
7547.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
7459.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
7319.0
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
7253.8
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
7149.0
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
7065.3
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
6968.5
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
6934.1
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
6711.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
6619.8
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
6581.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
6542.5
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
6389.1
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
6384.8
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
6295.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
6088.2
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
6071.1
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
5896.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
5734.3
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
5476.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
5422.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
5379.1
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
5378.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
5345.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
5246.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
5115.5
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
4724.2
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
4449.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
4427.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
4315.6
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
4309.9
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
3560.7
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
2913.3
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
2319.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
1589.1
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CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.