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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 34192.3
Min RPKM: 6471.8
Std RPKM: 4904.4
Median RPKM: 14271.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
34192.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
29684.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
25790.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
24963.7
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
24193.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
23317.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
23138.3
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
22635.4
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
22617.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
22464.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
21740.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
21734.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
21504.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
21098.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
20575.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
19595.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
19384.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
19333.9
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
19215.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
19141.2
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
18852.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
18752.5
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
18729.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
18682.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
18369.3
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
18190.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
17846.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
17753.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
17333.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
17298.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
17255.0
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
17254.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
17186.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
17156.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
16893.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
16878.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
16818.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
16765.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
16763.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
16439.6
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
16369.0
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
16340.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
16337.5
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
16287.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
16127.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
16061.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
15841.2
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
15641.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
15381.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
15222.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
15013.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
14835.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
14833.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
14815.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
14774.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
14748.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
14733.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
14537.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
14271.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
13995.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
13956.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
13898.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
13700.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
13641.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
13215.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
13034.6
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
12793.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
12706.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
12492.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
12426.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
12412.8
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
12318.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
12264.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
12163.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
12148.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
12113.9
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
12097.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
12015.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
12000.7
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
11968.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
11931.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
11925.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
11617.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
11601.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
11489.5
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
11323.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
11270.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
11251.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
11192.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
11165.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
10812.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
10759.9
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
10605.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
10596.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
10350.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
10231.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
10130.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
9917.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
9896.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
9766.6
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
9735.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
9588.8
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
9569.3
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
9474.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
9240.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
9227.0
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
8979.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
8927.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
8909.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
8749.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
8686.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
8335.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
7855.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
7714.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
7612.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
6979.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
6471.8
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.