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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 11827
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 20640.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 8853.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 26702.8
Min RPKM: 2125.0
Std RPKM: 3805.1
Median RPKM: 6490.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
26702.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
18819.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
17703.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
17663.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
16619.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
16440.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
16381.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
16122.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
15836.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
15215.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
14995.9
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
14981.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
14882.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
14346.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
13807.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
13764.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
13715.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
13574.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
13559.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
13406.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
12588.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
12268.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
12104.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
12071.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
11953.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
11819.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
11780.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
11770.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
11728.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
11657.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
11644.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
11594.5
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
11332.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
11141.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
11065.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
11024.2
GTEX-14753-2426-SM-5LU8U
60-69 years, male
10977.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
10939.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
10877.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
10785.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
10721.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
10707.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
10453.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
10196.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
10156.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
10140.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
10116.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
10076.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
9951.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
9826.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
9801.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
9776.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
9704.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
9692.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
9491.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
9437.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
9241.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
9224.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
9119.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
9091.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
9081.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
9014.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
8978.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
8947.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
8921.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
8912.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
8896.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
8744.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
8627.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
8463.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
8435.1
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
8399.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
8259.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
8207.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
8207.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
8163.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
8096.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
8073.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
8065.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
7992.8
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
7963.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
7897.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
7802.8
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
7752.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
7696.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
7580.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
7502.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
7488.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
7469.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
7438.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
7425.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
7421.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
7386.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
7379.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
7377.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
7356.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
7302.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
7261.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
7109.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
7004.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
6912.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
6911.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
6813.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
6673.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
6613.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
6607.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
6493.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
6487.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
6477.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
6466.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
6358.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
6321.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
6120.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
6095.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
6083.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
6073.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
6033.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
6014.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
6001.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
5965.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
5948.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
5917.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
5871.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
5860.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
5853.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
5847.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
5843.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
5843.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
5805.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
5753.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
5749.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
5692.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
5668.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
5621.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
5570.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
5562.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
5526.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
5517.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
5431.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
5348.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
5348.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
5307.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
5306.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
5238.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
5216.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
5214.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
5068.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
5067.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
5055.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
5044.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
5026.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
4998.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
4912.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
4911.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
4887.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
4804.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
4799.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
4758.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
4707.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
4703.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
4613.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
4552.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
4542.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
4512.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
4509.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
4464.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
4451.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
4392.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
4384.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
4371.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
4329.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
4303.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
4296.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
4283.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
4261.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
4260.6
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
4250.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
4227.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
4200.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
4139.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
4113.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
4075.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
4014.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
3955.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
3879.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
3783.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
3755.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
3748.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
3678.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
3563.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
3555.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
3531.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
3529.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
3447.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
3399.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
3350.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
3346.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
3234.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
3229.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
3110.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
3097.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
3064.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
3055.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
2967.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
2921.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
2908.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
2840.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
2820.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
2809.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
2732.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
2441.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
2323.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
2126.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
2125.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.