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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 20069
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 21630.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 14427.5
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 18154.4
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 17651.3
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 19248.3
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 21398.9
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 21303.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 21932.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 19899.7
Min RPKM: 1938.5
Std RPKM: 4064.7
Median RPKM: 9329.3
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
19899.7
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
17966.3
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
17351.6
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
16998.2
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
16770.5
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
16769.3
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
15834.2
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
15695.8
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
15553.8
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
15339.0
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
15290.1
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
15202.5
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
15106.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
14709.2
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
14420.6
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
14412.9
GTEX-13111-1526-SM-5EGJX
50-59 years, male
14366.8
GTEX-R55C-1426-SM-48FED
40-49 years, male
14324.9
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
14324.1
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
14284.2
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
14255.1
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
14230.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
14197.8
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
14078.7
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
14077.8
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
14028.6
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
14012.1
GTEX-XPT6-1626-SM-4B655
20-29 years, male
13839.1
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
13644.7
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
13624.1
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
13462.8
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
13447.6
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
13439.6
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
13162.8
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
13083.2
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
13001.7
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
12881.5
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
12748.4
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
12672.4
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
12653.2
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
12497.4
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
12418.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
11927.5
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
11917.8
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
11889.9
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
11872.5
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
11830.2
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
11801.2
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
11785.4
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
11569.7
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
11524.7
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
11501.2
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
11450.0
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
11421.6
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
11375.9
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
11327.3
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
11295.9
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
11086.2
GTEX-QLQW-1026-SM-447A9
30-39 years, male
11064.5
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
11054.4
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
11043.9
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
10991.8
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
10788.6
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
10780.2
GTEX-Y111-2426-SM-4TT23
50-59 years, male
10658.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
10585.5
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
10557.2
GTEX-RN64-2326-SM-48FDW
50-59 years, male
10342.8
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
10313.0
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
10208.5
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
10154.1
GTEX-V955-1926-SM-4KL1L
60-69 years, male
10132.7
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
10086.9
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
10027.2
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
9962.4
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
9914.6
GTEX-S95S-1126-SM-4B64E
60-69 years, male
9789.3
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
9772.1
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
9674.5
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
9635.4
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
9612.4
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
9594.4
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
9516.0
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
9441.9
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
9411.1
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
9345.0
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
9313.5
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
9285.5
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
8900.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
8806.2
GTEX-R55D-0126-SM-48FEL
50-59 years, male
8775.3
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
8755.1
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
8704.9
GTEX-REY6-0126-SM-48FDT
60-69 years, male
8391.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
8311.7
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
8274.8
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
8132.1
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
8091.0
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
8080.2
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
8073.9
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
8036.5
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
8028.3
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
8006.2
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
7971.2
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
7932.4
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
7755.9
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
7450.4
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
7276.6
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
7202.1
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
7145.1
GTEX-12696-0226-SM-5EGL3
60-69 years, male
7087.1
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
7028.8
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
6870.7
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
6758.9
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
6729.1
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
6568.8
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
6423.5
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
6393.4
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
6369.0
GTEX-S33H-0126-SM-4AD62
30-39 years, male
6275.7
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
6128.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
6120.0
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
6069.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
6069.1
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
5649.7
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
5641.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
5533.3
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
5402.5
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
5389.1
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
5374.9
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
5294.9
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
5150.0
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
5095.4
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
5040.0
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
5028.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
4950.5
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
4915.5
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
4882.2
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
4823.5
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
4770.2
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
4706.5
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
4598.9
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
4578.6
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
4571.8
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
4430.0
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
4364.4
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
4264.4
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
4146.0
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
4122.1
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
4110.1
GTEX-11OF3-1826-SM-5987N
60-69 years, male
4098.4
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
4082.2
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
3823.4
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
3820.1
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
3779.1
GTEX-13112-0226-SM-5P9IV
50-59 years, male
3750.8
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
3550.1
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
3537.4
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
3525.5
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
3468.3
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
3291.1
GTEX-X261-2326-SM-4PQYU
50-59 years, male
3136.1
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
3081.8
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
2938.3
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
2869.5
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
2867.0
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
2866.6
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
2731.4
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
2731.0
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
2630.2
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
2471.6
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
1938.5
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.