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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 96174.7
Min RPKM: 3931.5
Std RPKM: 22493.9
Median RPKM: 34429.9
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
96174.7
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
89997.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
88536.5
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
82999.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
82387.6
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
79611.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
78689.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
75998.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
75751.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
75606.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
74652.1
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
70193.8
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
70180.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
65659.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
64573.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
63478.1
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
63454.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
62613.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
59989.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
59788.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
58943.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
54998.6
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
54552.3
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
53528.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
52168.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
50525.4
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
50395.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
49517.9
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
48940.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
48207.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
47951.0
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
46411.6
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
45365.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
44723.3
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
43160.2
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
42861.2
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
42384.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
40589.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
40394.0
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
40117.9
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
39539.8
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
36826.5
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
35450.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
35263.5
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
34782.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
34748.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
34584.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
34275.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
33820.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
31307.4
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
31006.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
30971.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
29402.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
29311.7
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
29247.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
28768.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
28427.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
26741.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
26728.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
26226.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
25637.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
25436.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
24616.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
24079.6
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
22993.5
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
22277.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
21291.3
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
21029.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
20896.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
20555.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
20179.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
18928.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
17784.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
17495.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
17470.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
16926.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
16691.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
16301.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
16122.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
15593.3
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
15471.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
15284.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
15064.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
14971.9
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
14222.9
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
13471.0
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
13455.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
13312.4
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
12845.2
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
12592.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
11697.6
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
8495.9
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
6091.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
3931.5
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.