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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 25820.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 67100.7
Min RPKM: 4554.3
Std RPKM: 11934.1
Median RPKM: 32618.5
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
67100.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
59200.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
57392.3
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
56825.5
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
54258.0
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
53824.0
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
51972.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
48959.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
47260.1
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
47213.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
47111.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
46413.5
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
45872.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
45081.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
44573.8
GTEX-11GSP-3226-SM-5986O
60-69 years, female
44305.7
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
43984.2
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
43642.5
GTEX-11PRG-2926-SM-5987A
50-59 years, male
42726.1
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
42692.9
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
42526.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
42062.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
41964.7
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
41741.4
GTEX-1128S-2726-SM-5H12C
60-69 years, female
40907.0
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
40487.2
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
40332.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
40234.7
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
39366.8
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
39118.3
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
39066.7
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
39026.3
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
38997.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
38936.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
38637.5
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
38495.6
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
38190.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
38015.4
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
37945.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
37577.1
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
36670.1
GTEX-145MF-2726-SM-5O995
50-59 years, male
36475.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
36384.5
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
36337.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
36292.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
35601.9
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
35402.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
35368.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
35127.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
35033.8
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
35025.6
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
34876.4
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
34688.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
34561.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
33375.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
32680.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
32630.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
32606.3
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
32321.2
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
31967.5
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
31956.2
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
31272.4
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
31180.4
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
31107.8
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
31069.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
30544.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
30493.9
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
29678.2
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
29496.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
29199.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
28936.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
28722.4
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
28682.0
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
28503.0
GTEX-WL46-2926-SM-3LK82
50-59 years, male
28454.5
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
27957.1
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
27701.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
27547.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
27195.3
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
27184.8
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
26888.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
26497.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
26192.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
25590.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
25426.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
25280.2
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
25201.8
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
25067.3
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
24401.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
23552.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
22913.6
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
22804.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
21143.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
20965.1
GTEX-144FL-3026-SM-5O99C
50-59 years, male
20692.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
19374.0
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
19224.6
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
19054.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
18486.6
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
18414.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
17093.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
16853.7
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
16811.7
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
16208.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
15808.4
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
14317.0
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
13374.9
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
12758.8
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
10336.7
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
8799.9
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
7921.7
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
7240.5
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
6088.6
GTEX-X585-3026-SM-46MWF
50-59 years, male
4554.3
Show all
Brain - Frontal Cortex (BA9) RPKM: 28526.6
Samples: 108
Max RPKM: 77790.2
Min RPKM: 3786.1
Std RPKM: 15849.4
Median RPKM: 24926.6
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
77790.2
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
73726.2
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
73551.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
63065.3
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
61150.7
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
60498.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
59694.7
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
57994.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
57174.3
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
53145.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
51365.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
51241.9
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
50066.8
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
49179.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
47377.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
45481.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
45474.1
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
44851.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
44174.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
44033.5
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
43784.8
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
41986.8
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
41121.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
39662.8
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
39444.2
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
38593.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
38243.4
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
35629.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
35311.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
34055.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
34055.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
32596.6
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
31258.9
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
31123.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
30946.6
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
30171.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
29432.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
29039.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
28355.9
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
28321.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
28025.0
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
27415.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
27369.9
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
26896.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
26616.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
25787.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
25615.4
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
25595.0
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
25518.6
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
25421.6
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
25408.8
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
25347.2
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
25345.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
25319.4
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
24533.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
24517.8
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
23948.7
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
23787.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
23301.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
23107.4
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
22911.8
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
22732.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
22478.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
22425.2
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
21847.2
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
21797.1
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
21679.8
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
21452.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
21067.0
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
20951.6
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
20872.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
20329.4
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
20314.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
20276.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
20168.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
20104.1
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
19906.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
19878.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
19799.6
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
19506.7
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
18044.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
18028.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
17735.4
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
17536.0
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
16987.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
16965.1
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
16894.1
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
16857.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
16769.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
16623.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
14794.3
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
14419.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
14197.0
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
14064.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
13331.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
12774.7
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
12772.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
11242.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
10200.5
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
9249.1
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
8691.2
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
7108.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
6925.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
6073.1
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
5581.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
4839.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
4832.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
3786.1
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CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.