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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 78764.0
Min RPKM: 3919.6
Std RPKM: 17925.9
Median RPKM: 24320.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
78764.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
77391.1
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
72826.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
67369.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
67354.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
66518.9
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
66254.4
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
64621.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
63354.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
62435.4
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
60681.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
59281.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
58524.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
57404.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
57011.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
55291.4
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
53615.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
53472.4
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
52331.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
51388.1
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
50959.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
49138.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
47610.8
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
46812.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
46544.6
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
45862.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
44963.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
44659.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
44085.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
41385.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
40597.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
40540.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
39817.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
38890.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
37938.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
37364.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
37274.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
36990.1
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
36788.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
34713.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
33960.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
32871.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
32648.1
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
32552.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
32395.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
30842.8
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
30181.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
29766.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
29756.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
28578.4
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
28246.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
27267.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
26998.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
26863.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
25937.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
25192.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
25137.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
24650.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
24320.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
24160.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
23864.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
23717.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
23684.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
23576.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
23472.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
23287.2
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
23234.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
22526.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
22524.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
22150.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
22025.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
21864.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
21555.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
21530.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
21431.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
21413.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
21291.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
21166.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
21014.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
20903.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
20776.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
20241.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
19646.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
19458.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
18881.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
18867.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
18660.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
18435.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
18189.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
18152.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
16458.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
16429.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
16395.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
16347.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
16145.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
15481.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
15311.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
14861.3
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
14830.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
14814.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
14557.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
14128.0
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
12763.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
11529.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
11435.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
10916.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
10737.6
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
10184.5
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
9755.3
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
9368.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
7894.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
7225.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
6392.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
6249.6
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
4316.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
4074.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
3919.6
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.