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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 16559.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 21541.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 15832.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 32234.5
Min RPKM: 1353.5
Std RPKM: 4872.4
Median RPKM: 9496.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
32234.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
26285.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
25337.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
23859.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
20554.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
20494.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
20201.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
20044.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
19960.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
19856.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
19402.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
19119.1
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
18950.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
18788.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
18411.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
18068.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
17564.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
17066.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
16945.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
16869.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
16831.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
16337.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
16210.5
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
15770.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
15681.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
15614.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
15473.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
15431.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
15406.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
15310.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
15298.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
15188.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
15148.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
15109.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
14862.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
14612.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
14516.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
14435.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
14354.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
14341.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
14202.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
14068.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
13957.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
13804.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
13602.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
13431.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
13288.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
13262.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
13111.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
13089.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
13065.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
13064.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
13029.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
12895.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
12819.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
12717.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
12593.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
12522.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
12391.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
12380.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
12246.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
12174.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
12162.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
12115.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
12050.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
12019.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
12017.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
11978.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
11883.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
11822.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
11804.5
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
11433.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
11408.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
11225.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
11209.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
11167.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
11108.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
11027.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
10999.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
10990.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
10684.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
10637.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
10621.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
10551.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
10481.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
10463.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
10415.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
10296.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
10225.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
10223.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
10202.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
10149.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
10140.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
10094.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
10077.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
10043.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
9970.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
9936.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
9845.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
9831.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
9763.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
9728.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
9725.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
9723.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
9638.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
9580.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
9501.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
9491.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
9434.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
9255.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
9251.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
9193.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
9187.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
9097.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
9020.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
8916.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
8895.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
8834.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
8819.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
8743.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
8719.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
8689.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
8685.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
8562.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
8549.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
8540.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
8536.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
8524.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
8485.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
8449.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
8315.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
8288.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
8242.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
8218.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
8130.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
8092.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
8067.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
8048.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
8033.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
7987.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
7872.6
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
7836.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
7813.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
7734.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
7689.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
7675.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
7632.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
7569.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
7540.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
7429.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
7422.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
7408.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
7397.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
7392.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
7328.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
7310.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
7271.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
7259.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
7233.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
7207.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
7192.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
7133.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
7125.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
7099.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
7049.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
7033.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
6992.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
6919.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
6623.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
6575.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
6561.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
6556.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
6456.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
6426.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
6174.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
6125.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
6113.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
5978.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
5868.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
5811.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
5796.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
5790.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
5540.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
5522.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
5459.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
5351.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
5226.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
5195.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
5114.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
4973.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
4852.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
4813.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
4771.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
4665.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
4571.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
4463.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
4179.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
3910.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
3900.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
3818.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
3771.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
3480.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
3180.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
3109.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
3054.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
2490.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
2217.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
2182.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1952.9
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
1938.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
1772.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
1544.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
1468.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
1353.5
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.